Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2218 ATGCCCCCTTCTAGGAAATCTCGAAGTGTAAATAAGAGGTTTTCTAATGTTCGGGAGGCTGCATCTAATAAAGATAAAATTGCAGAGAATGCTAGCAAGAATAAGCAGAAGGCAAGTCCTGGTATTCAGAAGAAGAGAAAATTAGCTGACATGTTAGGGCCACAATGGAGTAAGGAGGAGCTTGAGCTTTTCTATGAAGCTTACCGTAAATATGGGAAAGATTGGAAGAAGGTTGCTCTTGCAGTACGTAATAGATCTGTGGAAATGGTAGAAGCACTGTACACTATGAACAGGGCATACTTATCTCTTCCAGAGGGTACTGCTTCTGTTGTTGGACTGATAGCAATGATGACAGATCATTATAGTGTACTGGGAGGAAGTGACAGTGGAAAAGAAAGCAATGACGATGCAGAAATAGCTAAAAGGTCCCAAAAACGTTTGCGGGGAAAGCAGCTAAATGACAATAAAGCATTAGATGGACACTTTTCAGATCATTCTCAGTCACATTCTGTTGCATCAGGTGATGGTTGCTTGTCATTGTTGAAGAAGAGGCATTCTGGAATTAAGCCTCATGCTGTAAGGAAAAGGACTCCCCGTGTCCCTATTTCTTATTCTATTGGTAAAGATAATGGGGAGAAGTTTTTTTCATCTGTCAGGCAGAGCTCTAAACAAATGCTTGATACTAATGATGTTGCTCATAAGATTGCATTAGCATTAACAGAGGCTTCACAAAGAGGTGGCTCTTCAAAAATTTCTGGATCACCAGACAAGAAAAGCATTCCTTCACCAGGTCTGAAAAGTGGGAAGCAGCGTGCTAAATCAGAAATAGCTGGAGGCAAGTTTTGCAATTCTGACTTGGATGATGGTAGTTCTGAGTTGAGTTTAGGAAGCACAGAAGGCGATAATGGGGATTATTCTAGAAAAACAATTCATCAGAGCGGTAGAGGAAATACTGGAAGAGGAAGGAATCAGGAAAAGAGAATAAAACAATATGGAAAGAATTTAGAACCAGAGGAAAATTTAAATAAGCATTTGAATGACATAAAGGAAGCTTCCAGTGGGACAGATGATGGTAAAAATCCAAGTTTTATCAAATCCAATTTTGACACAGATTTTTCTTATGCAAAAAATGCAAGGTCCTCTTACAAAGGTTCCAGGAAGAACAGTAAAAATCTACAGATTGAGAAAGATGAAGGTTCTGCTTTTGATGCCCTGAAAGCTTTGGCTGATCTGTCTTTGATGCTGCCAATAACAAACCCTTACACCGAGTCATCTGCCCACCTCAAGGAAGGAAACCATGATGTTGTTGATGAATCTAAAATGGAAACACATAATGTATTTCCTAGGATCAAAACCACTGCTTCTAGTAAATTGAGCAAGGCTTTTTCTGATAATGGAGCTGCTGTTCCTGAAGCAGAGGGAGAACAACAGCTTAATGCAGGATTCAGGAAAAGGAAACAAAAATCGTTTACCCTGAAAAATGATGAAACTCATACTGGTTCTCAGTTAAGTGGTTCCCAGAAAACCAAGGCTGCTGATGAGGTGAAGAAATCCATGGTTAAAGGTAAGCGGTCATCTGTTAGTACAGCACATTCAAGACTACTGAAAATGGTGAAATCCCCAGGAAATATGTCTTCAAGCACTAATGACAAAGGGGAAAGGGATGATTCATCTTTTTCACCCATGAAGGTTTCGTCTACTAACCCAGTCAGTCAAGTAAACAGAGGAAGGCCAAGAAGAAAGATGGAAAAACCAAAACCAATGGCACAACAAGATTCGCTGGTTTGTGGAAATATTTTTAGTAGTCAACATAATAAATCCATTACTTCACTCGAAGATAACTCTTCTATTCACAAGGGAAAGCTTATTAATTGTTTGTCTTCATATCAAACACGGCGATGGTGCACTTTTGAGTGGTTTTATAGTGCTATTGATTATCCATGGTTTTCAAAGCGAGAGTTTGTGGAATATTTAGACCATGTTGGATTGGGTCATGTTCCCAGATTGACTCGTATTGAGTGGGGAGTTATTAGAAGTTCTCTTGGCAGACCACGGAGATTTTCAGAGCAATTTTTGATAGAAGAAAAACATAAACTTAATCAATACCGGGAATCTGTTAGATCACATTATGCAGAAATTCTTGCTGGTACCAAGGAAGGGCTTCCTACTGATTTGGCCCAGCCTTTAATTGTGGGGCAGCGTGTTATTGCTATTCATCCGAGGACGAGAGAGATTCATGATGGAAGTGTACTAACTGTTGACCATTGTAGGTATCGGGTTCAGTTTGACCAGCCTGATCTTGGGGTTGAATTTGTCAAGGATATTGACTGCATGCCTTTTCATCCATTTGAAAACATGCCTACATCTCTGTTACAACACAATGTTACTTCTGCTCAAATACATGAGAACCTTAACGAGGTCAAGCTTAATGGGAAACTGAAACAAAGAAAGGTTGCCGAGCACACAATATTGTCCCCTAGTGACAACTCAGATAGCATAAAAAGTCTTTATATATCCTCCACTATGCCTGGAAGCAGTACTTTATCTAAAAAGGGATTTACTTCAAGCTCCAAATTACAACCTAAAGTTGTGTGCGGTGAGATTGGTAATGCCCAACTAGCATCAAGTTCTCAACCTTCCCTTCTTGAGCATGTCCATTCAAAAGAAGCTGACATATTAGCTATTTCAGAGCTGGCTCGTGCTCTAGACAAGAAGGAATTTGTATTGTCTGAACTGAAGCACATGAATGATGGGGTATCAGAAAGCCAGAAATACGGTGACAGCTCAGTGAAGGATTCAGAACCTTTTAAGAGGAATTATGCTTCAGTACTAAAGCAATTAACTGAAGCAAATGAACAGGTTTCTTCTGCCTTGTTTTGCTTGAGGCAACGCAATACATATCAAGCAAGCTCCTCAGTTATGTCATTAAAGCCCATGGCCAATTTTGATGATCCTGGTGGTCAGGCTAGTTCTTCCAATTGTTCAGCTTGCCACAACCAAGAATCTATATTTCAAAGTCATATTGCTGAAATTGTTGAAAGTTCTAGAAGAAAAGCACGGACAATGGTTGTTCAAGCTACACAGGCAATGTCAAATTTAAGTAAGGTTGAAAGAATTGAGGATGCAATAAATTTTATGAATAACCGGCTTTCAGTGGATGACCCTACTGCATCAGCCACCACTCTTCTACCTGCAGATTCTCTCACTATGACTTCTCAGGATCAATTGACTGCCAGCACATTAAATCCCTTGGCAAGTTGTCAAGTACAAGATGCTGAACTTAACAGTTCATCTGATCCAAATGAAATGAAAATTCCCTCAGAACTCATATCTCATTGTCTAGCCACACTGCTCATGATTCAGAAGTGTACCGAACGACAATTTCCCCCAGCTGATGTTGCTCAGGTACTAGATTCTGCAGTCACCAGTTTGCAGCCACTATGTTCAAAGAATCTTCCAATATATGGTGAGATACAGAAATGCATGGGTATCATAAGAAATCAGATTTTGGCACTCATACCTACCTAG 3528 0.3988 MPPSRKSRSVNKRFSNVREAASNKDKIAENASKNKQKASPGIQKKRKLADMLGPQWSKEELELFYEAYRKYGKDWKKVALAVRNRSVEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGKESNDDAEIAKRSQKRLRGKQLNDNKALDGHFSDHSQSHSVASGDGCLSLLKKRHSGIKPHAVRKRTPRVPISYSIGKDNGEKFFSSVRQSSKQMLDTNDVAHKIALALTEASQRGGSSKISGSPDKKSIPSPGLKSGKQRAKSEIAGGKFCNSDLDDGSSELSLGSTEGDNGDYSRKTIHQSGRGNTGRGRNQEKRIKQYGKNLEPEENLNKHLNDIKEASSGTDDGKNPSFIKSNFDTDFSYAKNARSSYKGSRKNSKNLQIEKDEGSAFDALKALADLSLMLPITNPYTESSAHLKEGNHDVVDESKMETHNVFPRIKTTASSKLSKAFSDNGAAVPEAEGEQQLNAGFRKRKQKSFTLKNDETHTGSQLSGSQKTKAADEVKKSMVKGKRSSVSTAHSRLLKMVKSPGNMSSSTNDKGERDDSSFSPMKVSSTNPVSQVNRGRPRRKMEKPKPMAQQDSLVCGNIFSSQHNKSITSLEDNSSIHKGKLINCLSSYQTRRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLIEEKHKLNQYRESVRSHYAEILAGTKEGLPTDLAQPLIVGQRVIAIHPRTREIHDGSVLTVDHCRYRVQFDQPDLGVEFVKDIDCMPFHPFENMPTSLLQHNVTSAQIHENLNEVKLNGKLKQRKVAEHTILSPSDNSDSIKSLYISSTMPGSSTLSKKGFTSSSKLQPKVVCGEIGNAQLASSSQPSLLEHVHSKEADILAISELARALDKKEFVLSELKHMNDGVSESQKYGDSSVKDSEPFKRNYASVLKQLTEANEQVSSALFCLRQRNTYQASSSVMSLKPMANFDDPGGQASSSNCSACHNQESIFQSHIAEIVESSRRKARTMVVQATQAMSNLSKVERIEDAINFMNNRLSVDDPTASATTLLPADSLTMTSQDQLTASTLNPLASCQVQDAELNSSSDPNEMKIPSELISHCLATLLMIQKCTERQFPPADVAQVLDSAVTSLQPLCSKNLPIYGEIQKCMGIIRNQILALIPT* 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2218 1175 MobiDBLite consensus disorder prediction 126 170 - -
Apr9g2218 1175 SMART DIRP_2 640 741 IPR033471 -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 1 47 - -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 242 325 - -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 522 548 - -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 287 319 - -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 242 256 - -
Apr9g2218 1175 ProSiteProfiles SANT domain profile. 51 88 IPR017884 -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 489 591 - -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 559 574 - -
Apr9g2218 1175 CDD SANT 56 90 IPR001005 -
Apr9g2218 1175 PANTHER LIN-9 1 1175 IPR010561 GO:0006351|GO:0017053
Apr9g2218 1175 SUPERFAMILY Homeodomain-like 52 99 IPR009057 -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 494 509 - -
Apr9g2218 1175 Pfam DIRP 639 740 IPR033471 -
Apr9g2218 1175 Gene3D - 3 108 - -
Apr9g2218 1175 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1175 IPR028306 -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 1 17 - -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 18 32 - -
Apr9g2218 1175 MobiDBLite consensus disorder prediction 131 163 - -
Apr9g2218 1175 SMART sant 52 100 IPR001005 -
Apr9g2218 1175 Pfam Myb-like DNA-binding domain 55 90 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2218 Apr-Chr9 30082258 30100128 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr9g2218 DIRP 2.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2218 - - gmx:100781646 1957.57