Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2217 ATGTACATTTCGAACACATACAAACCCTTTCTCCACCCAAATCGCATTATCGCATTCACAACAACATGCCAAACACTGAAATTTCACCCTCTTCTTAATCTCCATCTTTACTCACCAACACCAACACCTTCATCCCTATCCCTCAGATTCAAATTCACCACCACTTCCGACCCACACTCTTTCACCGTCTCTTATCTCGTCAACAGCTGTGGCTTCTCCCCAGAATCTGCTCTCACAGTTTCCCAAAAGTTCCGTCTCAACAATCCCCAAAAACCCGATTCAGTTCTCGCCTTCTTCCGTAACCGTGGCTTCTCCAATTCTCAGATACACGGCATTATCAAACGTCAGCTTCCGCTTCTTCTGTCTGACCCCGACAAGGTTCTCTTGCCAAAGTTTGAATTTTTAGCCTCAAAAGGTGTTTCTAGAGCCGACATTGTTCGCATGGTTAGCATCGGTCCAAGATTCCTCTCCAGAAGCTTGGAGAATCATATAGTTCCATCGTATGAATTTGTAAGAGGGTTTCTTCAATCTGATGATCAACTCATTGCTTGTATGAATCGTAATTCTTCTTTTTTGTCTGATGGTCGTTTTGCACTTAACTCCGAATTGTTGATTGATAATGGAGTTAAACGTTCAGACATTGCTAAGTTGCTTCGTCGTTGGCCTAGTATTTTATGCTCTGCTAATTTGTTAAAGACTATTACTGAATTGAAGGGAATGGGTTTTGTTCCCTCAACTTCTTCTTTCTGTGTGGCTTTGCTTGCAAAAAGGACTGTGAATAAAGCCAAGTGGGATGAGAAAGTTGAAACCTTTAAGAAGTGGGGATGGTCGCAGGAACATGTTCTTGAAGCGTTTAAGAGACAGCCTTATTGTATGTTGTCATCAGCTGATAAAATTAATGCAGTGATGAGTTATTTTGTTAGTCAGTTAGGTTGTGATTCCTTGGAACTTGTTAGATCTCCTGTGGTTTTTCAGTTGAGTCTCCAGAAGAGGCTTATTCCAAGGGCTTCGGTGGTGGATTACCTTAACTCCAAAGGTCTGCGGAAAAAGGATGCTAGCATGACTACACCGTTTGCCCTCCCTGAGAAATTGTTCCTCAAAAGGTTTGTGAAACGTTTCAAGGAGCATTCTTCTCATTTGTTAAAGATGTACGAGAAAAATATGAACAGGGAGAACACTTGCTTATAG 1188 0.4175 MYISNTYKPFLHPNRIIAFTTTCQTLKFHPLLNLHLYSPTPTPSSLSLRFKFTTTSDPHSFTVSYLVNSCGFSPESALTVSQKFRLNNPQKPDSVLAFFRNRGFSNSQIHGIIKRQLPLLLSDPDKVLLPKFEFLASKGVSRADIVRMVSIGPRFLSRSLENHIVPSYEFVRGFLQSDDQLIACMNRNSSFLSDGRFALNSELLIDNGVKRSDIAKLLRRWPSILCSANLLKTITELKGMGFVPSTSSFCVALLAKRTVNKAKWDEKVETFKKWGWSQEHVLEAFKRQPYCMLSSADKINAVMSYFVSQLGCDSLELVRSPVVFQLSLQKRLIPRASVVDYLNSKGLRKKDASMTTPFALPEKLFLKRFVKRFKEHSSHLLKMYEKNMNRENTCL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2217 395 Gene3D Transcription termination factor 3, mitochondrial 74 196 IPR038538 -
Apr9g2217 395 Gene3D Transcription termination factor 3, mitochondrial 197 383 IPR038538 -
Apr9g2217 395 SMART mt_12 215 243 IPR003690 GO:0003690|GO:0006355
Apr9g2217 395 SMART mt_12 110 141 IPR003690 GO:0003690|GO:0006355
Apr9g2217 395 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Apr9g2217 395 SMART mt_12 314 348 IPR003690 GO:0003690|GO:0006355
Apr9g2217 395 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Apr9g2217 395 PANTHER CGI-12 PROTEIN-RELATED 39 390 IPR003690 GO:0003690|GO:0006355
Apr9g2217 395 Pfam mTERF 96 195 IPR003690 GO:0003690|GO:0006355
Apr9g2217 395 Pfam mTERF 202 365 IPR003690 GO:0003690|GO:0006355
Apr9g2217 395 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 39 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2217 Apr-Chr9 30078722 30080984 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr9g2217 mTERF 5.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2217 K15032 - gmx:102667698 410.994