Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2207 ATGGGTAGTTGTCTTCCTTGTTTTGGAGGAGGATCATCCAGCAGCACACGCACTGGGTCGAGGAGATCTTCTAGAGGATCTTCATCTTCTCGATCTCGCCAATCATCCATGGCTACCTCAACACCCAGAGCAAATTTTCCCACTAATGCGGGGCTGGTCAGAATTTCTTCAAGAACATTTTCGTTCCAAGAGCTTGCAGTTGCTACACATAATTTTAGGCCAGAATCTTTGTTAGGTGAAGGTGGCTTTGGGCGTGTATACAAAGGTCGACTTAAAACTGGGCAAAGAGTTGCTGTGAAACAGTTTGACGAAAAGAGCCTTCAAGGAAACTCAGAATTTTTAGCGGAGGTTCTCATGCTCAGCCTCTTACATCACCCAAATCTTGTGAACTTAATTGGTTATTGTTCTGACGGTAATCAGCGGCTGCTTGTTTATGAGTACATGCCATTGGGGTCTTTGGAGGATCATTTACATGATGTTCCTCCTGACAAGGAGGCCCTTGACTGGAACACAAGGATGAAAATAGCAGCTGGTGCAGCAACCGGATTGGAATATTTGCATGACAAGACAGACCCCCCTGTAATATACAGAGACTTTAAATCATCTAACATCCTCCTTGGCGAGGATTATTTTCCAAAGCTATCAGATTTTGGGTTAGCAAGAACTGGTCCCACGGGTGATAATACTCATGTATCCACACGAATAATGGGAACATATGGATATTGTGCCCCAGAATATGCCATGACTGGGCAACTAACTTTGAAATCTGACATCTACAGTTTTGGTGTGGTGTTACTCGAACTTATTACGGGGCGCAAGGCTATTGATAAAAGACGTCCACCTGGAGAGCAGAACCTTGTTATATGGGCCCAACCTCTCTTTAAAGACCGTAAGAAGTTCGCCAGAGTGGCTGATCCTCTACTTCTGGGGCGTTTTCCAATGCGAGGACTTTATCAAGCACTTGCTGTTGCAGCAATGTGTTTGCAGGAACAAGCTACTGCAAGGCCTGTAATTGGGGATGTTGTGACTGCTCTCGCATACCTGGCTACACAGACAGGTGGCCAAAATGCATCATCAAGTCAGTCTGACATTGGTCTATCATTGCCGACGACTAGGGATGAAGTAAGGGGCGTGGCTGATAGCATAGATCGTGGAGGGATTGGCTCCTCTTCCACCCAGAGAAATACACCAGGTATTAGGATCAGAGAGGGTAAGGAAGCAGAGAAAGAAATTGGTGAAGGGTCGGGGAAGGAATCTCAGAGAGGTGGCTCTGAAAATACTGCAAGAGGTAGAGAAAGTCCAAGGAATCTGAGGGAAAAGAAGGCAGGAAAGAGTAGGTTTTTTTGA 1347 0.4573 MGSCLPCFGGGSSSSTRTGSRRSSRGSSSSRSRQSSMATSTPRANFPTNAGLVRISSRTFSFQELAVATHNFRPESLLGEGGFGRVYKGRLKTGQRVAVKQFDEKSLQGNSEFLAEVLMLSLLHHPNLVNLIGYCSDGNQRLLVYEYMPLGSLEDHLHDVPPDKEALDWNTRMKIAAGAATGLEYLHDKTDPPVIYRDFKSSNILLGEDYFPKLSDFGLARTGPTGDNTHVSTRIMGTYGYCAPEYAMTGQLTLKSDIYSFGVVLLELITGRKAIDKRRPPGEQNLVIWAQPLFKDRKKFARVADPLLLGRFPMRGLYQALAVAAMCLQEQATARPVIGDVVTALAYLATQTGGQNASSSQSDIGLSLPTTRDEVRGVADSIDRGGIGSSSTQRNTPGIRIREGKEAEKEIGEGSGKESQRGGSENTARGRESPRNLREKKAGKSRFF* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2207 448 PANTHER OS07G0668900 PROTEIN 30 365 - -
Apr9g2207 448 Gene3D Transferase(Phosphotransferase) domain 1 148 367 - -
Apr9g2207 448 ProSiteProfiles Protein kinase domain profile. 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2207 448 PANTHER OS07G0668900 PROTEIN 30 365 - -
Apr9g2207 448 MobiDBLite consensus disorder prediction 1 45 - -
Apr9g2207 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Apr9g2207 448 MobiDBLite consensus disorder prediction 352 448 - -
Apr9g2207 448 MobiDBLite consensus disorder prediction 8 45 - -
Apr9g2207 448 MobiDBLite consensus disorder prediction 431 448 - -
Apr9g2207 448 MobiDBLite consensus disorder prediction 399 416 - -
Apr9g2207 448 SUPERFAMILY Protein kinase-like (PK-like) 54 345 IPR011009 -
Apr9g2207 448 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Apr9g2207 448 Pfam Protein tyrosine and serine/threonine kinase 76 274 IPR001245 GO:0004672|GO:0006468
Apr9g2207 448 MobiDBLite consensus disorder prediction 352 368 - -
Apr9g2207 448 CDD STKc_IRAK 78 345 - -
Apr9g2207 448 Gene3D Phosphorylase Kinase; domain 1 48 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2207 Apr-Chr9 29993102 29995564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2207 3 395 Glycoside Hydrolase AT3G07070 54.988 6.69e-154 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr9g2207 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2207 - - zju:107426910 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2207 9 29993102 29995564 Apr1g1664 1 26339333 26347496 PCT