Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2205 ATGGAAGGCTACACTGACACTGACTCTGTCACGCCACTACTCTCTCAAATCCTACCTTTTTCTTCTTCTTCTTCTTCTCTTCACCCTTCTTCTGTTGACCCTTCTTCAACCATTGCTGAAACGGGTAACAACACCACCTCCAAAAAGCGTGATCGACAATTGGGTCATAGCAATTGCGAGATCCTCAAGATGGAACGAGAACGAAGGTCCAAGATGACTCAAATGTTCACTCAGCTTAGAACCACTGTCCCTGGTCTCTTTCCTCAGGCCACAAGGGAAGTGATCATCAACGAAACAATTGAGTACATTAAGGAACTTGAGAAGAAGAAGCAAAGGTTGGAGGAGCTCAAGGAATCAATGAAAGAAGAACAAGGGAGATCCATGCTTCCATGTGCTAACAATAGGAATTGTTCCATCACGGTTACTGTTTCTAGCAATGTGGCATTCTTTGGTATTCAATCTGTGGCACGACCCGGTTTGATCACAATAATTTTAAAGCTGTTCTCCAAGCACCAAGCTGAGATTTTAGCTGCAAATGTCTCAGTTAATAACGGGAAATTGATATTAGCAATCACGGCTTTGGTACACAATGGTGGTGACGGAAACAGTGACATTGAAAATATAAAGAAAGATATCATGAGTTTGCAGGTTTAA 654 0.422 MEGYTDTDSVTPLLSQILPFSSSSSSLHPSSVDPSSTIAETGNNTTSKKRDRQLGHSNCEILKMERERRSKMTQMFTQLRTTVPGLFPQATREVIINETIEYIKELEKKKQRLEELKESMKEEQGRSMLPCANNRNCSITVTVSSNVAFFGIQSVARPGLITIILKLFSKHQAEILAANVSVNNGKLILAITALVHNGGDGNSDIENIKKDIMSLQV* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2205 217 MobiDBLite consensus disorder prediction 21 44 - -
Apr9g2205 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 126 IPR036638 GO:0046983
Apr9g2205 217 MobiDBLite consensus disorder prediction 21 57 - -
Apr9g2205 217 Gene3D - 61 134 IPR036638 GO:0046983
Apr9g2205 217 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 56 106 IPR011598 GO:0046983
Apr9g2205 217 Pfam Helix-loop-helix DNA-binding domain 63 107 IPR011598 GO:0046983
Apr9g2205 217 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 36 214 - -
Apr9g2205 217 Coils Coil 96 126 - -
Apr9g2205 217 SMART finulus 62 112 IPR011598 GO:0046983
Apr9g2205 217 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 36 214 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2205 50 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 26.712 9.02e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr9g2205 HLH 1.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2205 - - aprc:113874666 400.979