Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2197 ATGCTGAAGACTGGTGGGGTGGTTTGGAATCTGTTGAAGTTGATGGCTTCTACAATCGGTTTTGGAGCATTGTACGAGAAACTAACGACAGTGATGACCTCGGATCATGCATCAGTGGTCTCAATGAACCTTTTTGTTGCTCTTCTAAGCACTTGCATCATTATCGGTCACTTGTTGGAGGAGAACCGATGGATTAATGAATCCATCACTGCCCTTCTCATTGGTCTCTGTACTGGGGTCTTTATATTGCTTACAACTGGAGGAAAAAGCTCTCATATACTAGTCTTCAGCGAAGATCTTTTCTTTATTTACCTTCTCCCACCCATCATTTTCAATGCCGGGTTTCAGGTGAAGAAGAAACAATTTTTCCGCAATTTTATGACTATAATGCTCTTTGGGGCAGTTGGTACTTTGATATCATTCTGCATCATATCACTAGGTGCCATACACTTTTTCCAGAAATTGGATATTGGTTCCCTCATGATTGGAGATTATCTAGCAATTGGAGCAATATTTTCTGCAACAGATTCTGTTTGCACGTTGCAGGTTCTTAATCAAGATGAGACTCCTTTGCTATACAGCCTGGTGTTTGGGGAGGGGGTAGTAAATGATGCCACCTCCGTAGTTCTCTTCAAAGCAATTCAGAATTTTGACCTCTCCCACATTGACTTAACCACTGCCTTACAGTTAATAGGAAATTTTTTATATTTATTCATTGCAAGCACTGTACTGGGAATCTTTGCTGGATTGCTCAGTGCATACATTATTAAAAAGCTATATTTTGGCAAGCATTCTACAGACCGTGAGGTTGCTCTCATGGTGCTCATGGCTTATCTTTCATATATGCTATCGGAACTATTTTCTTTGAGTGCAATTCTGACTGTGTTCTTCTGCGGTATTGTTATGTCTCACTACACGTGGCATAATGTGACGGAAAGTTCAAGAGTGACAACCAAGCATGTTTTTGCCACTTTGTCATTCATTGCTGAAATCTTTATCTTCCTTTATGTGGGGATGGATGCATTGGATATAGAGAAGTGGCGAATTGTAAGTCAAAGTCCAAGAAAATCAATAGGGGTCAGTTCGTTGCTGTTGGCACTTATCCTAGTGGGAAGAGCTGCATTTGTTTTCCCTCTGTCCTTCTTATCCAACTTGCTTAAGAAGTATCAATCTGAGAAAATTGAGTTCAAGCAACAAATAACAATCTGGTGGGCGGGTCTCATGCGTGGAGCTGTTTCTATTGCACTTGCTTACAATCAGTTTACCAGACTAGGCCATACTAAATTGCGGGAGAATGCCATCATGATCACTAGTACTATCACTGTTGTACTCTTCAGCACATTGGTGTTTGGGTTGATGACCAAGCCACTTGTGAGGTTATTGCTTCCTTCCTCTAAACACATAATCAGCTTACAGTCCCCACCATCGACCCCAAAATCATTCACAGTGCCACTTCTTAGCAATGGACAGGATTCGGGGGTCAATGGTGGCACCCCGAATGGGCCTCGACCAAACAGCTTGAGGATGCTCCTAAGCTGCATTCCTAATCGAGGGGTACACCACTATTGGCGCAAATTTGATGATTCTGTCATGCGGCCTATCTTTGGTGGACGAGGTTTTGTACCTTATGTTCCTGGTTCACCCCTTGAACAAAGTGTTCATCAGTGGCATTAA 1674 0.4223 MLKTGGVVWNLLKLMASTIGFGALYEKLTTVMTSDHASVVSMNLFVALLSTCIIIGHLLEENRWINESITALLIGLCTGVFILLTTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFCIISLGAIHFFQKLDIGSLMIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDLTTALQLIGNFLYLFIASTVLGIFAGLLSAYIIKKLYFGKHSTDREVALMVLMAYLSYMLSELFSLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHVFATLSFIAEIFIFLYVGMDALDIEKWRIVSQSPRKSIGVSSLLLALILVGRAAFVFPLSFLSNLLKKYQSEKIEFKQQITIWWAGLMRGAVSIALAYNQFTRLGHTKLRENAIMITSTITVVLFSTLVFGLMTKPLVRLLLPSSKHIISLQSPPSTPKSFTVPLLSNGQDSGVNGGTPNGPRPNSLRMLLSCIPNRGVHHYWRKFDDSVMRPIFGGRGFVPYVPGSPLEQSVHQWH* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2197 557 PANTHER SODIUM/HYDROGEN EXCHANGER 24 557 IPR018422 GO:0006812|GO:0015299|GO:0016021
Apr9g2197 557 Pfam Sodium/hydrogen exchanger family 47 459 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr9g2197 557 Coils Coil 379 399 - -
Apr9g2197 557 Gene3D - 162 213 - -
Apr9g2197 557 PANTHER SODIUM/HYDROGEN EXCHANGER 3 24 557 - -
Apr9g2197 557 PRINTS Na+/H+ exchanger signature 100 111 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr9g2197 557 PRINTS Na+/H+ exchanger signature 114 128 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr9g2197 557 PRINTS Na+/H+ exchanger signature 129 137 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr9g2197 557 PRINTS Na+/H+ exchanger signature 169 179 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2197 Apr-Chr9 29925668 29929325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2197 21 555 Antiporters AT3G05030 74.259 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2197 - - ccaj:109808409 994.956