Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2192 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCAAAGGACATGGCCGAAAAGAAGATGGAAAACAGGGATTTTGTCGGGGCTCGTAAACTTGCTCTTAAGGCTCAGCAGCTGTACCCTGATTTGGAAAATATAAGTCAAATGCTTGTTGTATGTGATGTGCACTGCTCTGCTGAGCAGAAATTCTTTGGTAATGAGATGGATTGGTATGGAATTCTTCAGCTTGAACAGACAGCTGGTGATGCAGTGATTAAGAAGCAATATCGGAAGTTTGCTCTACAACTTCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGAGAAGCTCAAAGAGTGCTTTTGGACAGAGAAAAACGGTCTCTTTTTGACATGAAGCGTAGAGTCCCAATGAGCAAACCTGCCACATCACGTTTTAAATCTGAAATGAGAAGCAATGTTAGGCCCAACTTTACAAGCTCAAATGTTCGACAGCAGCAGCAGCAACCTAGGCAGCCAGTGCAGCAGCAGCAGCAAAATGGTGGCCGCTCTACGTTTTGGACTGTCTGCCCATTTTGTTCTGTTAAGTATCAATATTACAGAGAAGTTTTAAATAGGTCTCTTCGTTGTCAACATTGCCATAGGCCCTTTGTTGCATATGATATAGGTATGCAGGGTACATCATCACCAGCAACTAATTCAACTCAGGAAGCTTCTGTACAGCAGAAAGATGGTGCTGAGAAGCCCAATAAAGGGCCTTGCAAGAAAAAAGGTCCTACTAATGTCTCTGGAAAACCAAATAGAAAGAGAAAGCAGGTGGGAGAATCCAGTGAAAATTCTGATTCTGAAGGAGATGCAGTTGCAGGCAAGGATGGTTTTTCTGGTGTTGAAAAGTGTTCAACTTATAGAGAAGAGCATCCACGCAGATCTACAAGGCAAAAGCATAAAGTTTCTTACAGGGAGAATGTTAGTTACAATGATGATGGCTTATTGAGACCTTCAAAAAGGGGTCTTGAGAGTGGACCACCTTGTGGTGATGGTGACACTACTGGTGGGGCAACTAAAATGAATGATCAGAATGGTTTAGCTGCTGATCTAAAAGATGAAAATAAAGAGTTAAAACAGAAGCAACACTTAAATCCTGAAGAGAACTTAAGAAATAACAATGAGGAAACTAACACAGTTAGGGGGAAAGATGCAGTGGGAGGGTCAAAGCAAATGAGTGAAACTTCGGAGCATACTCCAGATTCAACCGCCAAAGCAACAAATCATCCAAATGTTTATGTCTATCCTGATGCAGAGTTCAGTGACTTTGACAAGGATAGGAAAAAAGAATGTTTTGCGGCTGGGCAGATTTGGGCTATTTATGACACAACAGATGGCATGCCTAGATTCTATGCTTTAATCAGAAAAGTTTTGTCTTCTAGATTCAAGCTGCAGATAACATGGTTTGTATCACATCCAGATTGCAACGATGAAATCAACTGGGTAAATAAGGAATTGCCTGTTGCTTGTGGGAAATATAAACTTGATATGGCTGACATCACTGAAGATCATCTGATGTTCTCTCATCTGGTTTTGTGTAAAAAGATTGGCCGCAATACCTTTAAATTGTATCCTAGAAAGGGGGAAACTTGGGCCCTTTTTAAGAATTGGGATATCAAGTGGTACATGGATGTGGAATCTCATGGGCAGTATGAATACGAGTTTGTTGAAATCTTGTCAGATTTTGTTGAAGGTGAGGGTGTATATGTTGCGTATTTGGCTAAATTGAAAGGTTTTATAAGTATCTTCTTTCAAATTTTGAAGGAAGATAAACAATCATTTCTAATCCCATCACTAGAATTATTTAGATTCTCTCACAGGGTTCCATCTTTCAAAATGACTGGTCAGGAAGGAGTTAACATTCCAATAGGATCTTATGAACTTGATCCTGCAGCTTTACCAATGAATCTTGAAGAGATTTCTATTCCTGAAAATTTGGATGTGAAGACATCTAGCGGTGAGTATGCAAGGTCTTCAGATAAATCAGAACCCATGATGACATGTGGGGGAGATGTATCTATTCCCAATGTCAATCTGGAAGGAAGCAATTTGGCGGAGGAGAACAAGAATTCAGTTGATGACACTGCTGATTGCCGTGCTCCTCCAGCATGGACCTCTGGAAGAATTCAAATTCCAGATACACGATTCTTCAATTTTGATGCTGGGAGGTCCCGTGAAAAGTTTCAGATAGGTCAGATTTGGGCATTTTACAGTGATGAGGACGGATTGCCAAAATATTATGGTCAGATTAGTAAGATTGAGACAAGCCCAGATTTTAAATTGCATGTCTATTGGCTTACTTGCTGCTGGCTATCGGAGGATACCATTAAATGGGAAGACAAAGATATGCTTATCTCCTGTGGTAGATTTAAAGTTAATAAAAAGGCAAAATTTCTGAGTGTTTATAGTGACACCTCTTCTGTTTCACATCAAGTGCAGGCTGATACTGTTGGTAAGAATAGGAATTATGTCATCTTTCCGAAGAAAGGTGAAGTTTGGGCATTATATAGAAAATGGTCAAATAAAATCAAATGTTCTGACTTGAAAAATTGGGAGTATGACATAGTGGAAGTTCTTGAAGAAGCTGATCTGTACATAAATGTTTTAGTTCTGGAGTTTGTTAGTGGTTTTAGTTCAGTTTTCAGGGGCAAATCAAATGAAGGATCATATGTCAACCTGAGAATACCCAGAAAAGAGTTGCTTAGGTTCTCCCACCAAATCCCAGCTTTCAAGCTGACAGAAGAGCACGACCATCTAAAAGACTCTTGGGAACTTGATCCAGGTGCGCTAACAATTAATTATTACGGCTTGAGATGA 2853 0.4003 MDCNKEEALRAKDMAEKKMENRDFVGARKLALKAQQLYPDLENISQMLVVCDVHCSAEQKFFGNEMDWYGILQLEQTAGDAVIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRSLFDMKRRVPMSKPATSRFKSEMRSNVRPNFTSSNVRQQQQQPRQPVQQQQQNGGRSTFWTVCPFCSVKYQYYREVLNRSLRCQHCHRPFVAYDIGMQGTSSPATNSTQEASVQQKDGAEKPNKGPCKKKGPTNVSGKPNRKRKQVGESSENSDSEGDAVAGKDGFSGVEKCSTYREEHPRRSTRQKHKVSYRENVSYNDDGLLRPSKRGLESGPPCGDGDTTGGATKMNDQNGLAADLKDENKELKQKQHLNPEENLRNNNEETNTVRGKDAVGGSKQMSETSEHTPDSTAKATNHPNVYVYPDAEFSDFDKDRKKECFAAGQIWAIYDTTDGMPRFYALIRKVLSSRFKLQITWFVSHPDCNDEINWVNKELPVACGKYKLDMADITEDHLMFSHLVLCKKIGRNTFKLYPRKGETWALFKNWDIKWYMDVESHGQYEYEFVEILSDFVEGEGVYVAYLAKLKGFISIFFQILKEDKQSFLIPSLELFRFSHRVPSFKMTGQEGVNIPIGSYELDPAALPMNLEEISIPENLDVKTSSGEYARSSDKSEPMMTCGGDVSIPNVNLEGSNLAEENKNSVDDTADCRAPPAWTSGRIQIPDTRFFNFDAGRSREKFQIGQIWAFYSDEDGLPKYYGQISKIETSPDFKLHVYWLTCCWLSEDTIKWEDKDMLISCGRFKVNKKAKFLSVYSDTSSVSHQVQADTVGKNRNYVIFPKKGEVWALYRKWSNKIKCSDLKNWEYDIVEVLEEADLYINVLVLEFVSGFSSVFRGKSNEGSYVNLRIPRKELLRFSHQIPAFKLTEEHDHLKDSWELDPGALTINYYGLR* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2192 950 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 948 - -
Apr9g2192 950 Pfam DnaJ domain 67 128 IPR001623 -
Apr9g2192 950 MobiDBLite consensus disorder prediction 401 421 - -
Apr9g2192 950 PANTHER - 1 948 - -
Apr9g2192 950 MobiDBLite consensus disorder prediction 372 422 - -
Apr9g2192 950 MobiDBLite consensus disorder prediction 135 178 - -
Apr9g2192 950 CDD DnaJ 67 120 IPR001623 -
Apr9g2192 950 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Apr9g2192 950 SUPERFAMILY Chaperone J-domain 63 132 IPR036869 -
Apr9g2192 950 SMART dnaj_3 66 123 IPR001623 -
Apr9g2192 950 Coils Coil 353 373 - -
Apr9g2192 950 Pfam Domain of unknown function (DUF3444) 423 629 IPR024593 -
Apr9g2192 950 Pfam Domain of unknown function (DUF3444) 720 927 IPR024593 -
Apr9g2192 950 MobiDBLite consensus disorder prediction 224 356 - -
Apr9g2192 950 PRINTS DnaJ domain signature 69 87 IPR001623 -
Apr9g2192 950 PRINTS DnaJ domain signature 87 102 IPR001623 -
Apr9g2192 950 PRINTS DnaJ domain signature 103 123 IPR001623 -
Apr9g2192 950 MobiDBLite consensus disorder prediction 142 178 - -
Apr9g2192 950 MobiDBLite consensus disorder prediction 224 240 - -
Apr9g2192 950 Gene3D DnaJ domain 64 182 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2192 Apr-Chr9 29880735 29885200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2192 4 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.747 7.36e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2192 - - gmx:100795200 1424.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2192 9 29880735 29885200 Apr1g1682 1 26490853 26496467 PCT