Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2178 ATGGGTTGTGTACATGGCAAGTATTGCTGTGGCAACTCTTCTTCATCAGAGGATGGCTCCAGGGATTACCGAGAAATTGGCTACTTTCATGGCCACAGGAAGAACGTACTCGCTCAGAAATCATTGAAGCATGCTTCTGTTCCTTCTCGCAACTTCATTTTGGAGTACACTTTTCTCACTCAGAGGGGATTCTACCCTGACTCACCTGATAAAGAAAACCAAGATAGTCTCTGCATTAGTACACAAATCCAAGGTAATCCCAATGTCCATTTCTTTGGTGTCTATGACGGGCATGGCCAATTTGGTAGTCAGTGTTCCAACTTCGTCAAGGATAGGTTGGTAGATAAGTTGTCAAATGATCCCGCATTGTTGGAGGACCCTGTTCAAGCTTACACTTCTGCATTCTTGACAACGAATCATGAGTTGCATACTAGTGAGATTGATGATTCTATGAGTGGCACCACCGCAATCACCGCTCTTGTTATTGATGACACCCTTTATGTTGCTAATGTTGGTGATTCTAGAGCTGTGCTGGCTGTTAGGGATGGGAATCGCATTATTGCTGAGGACTTGTCCTCTGATCAGACACCATTTAGGAGAGATGAATATGAGAGAGTGAAACTCTGTGGGGCGAGGGTGTTGAGTGTTGATCAAGTGGAAGGGCTCAAGGATCCAGATATCCAGAATTGGGGTGATGAAGAGAGTCGGGGTGGTGATCCTCCCAGATTGTGGGTTCCAAATGGGATGTATCCGGGAACTGCATTTACAAGGAGTATCGGGGATAGTTTTGCGGAGACTATCGGTGTCATTGCTGTTCCTGAGGTGTCAACAGTTCAGCTTACACCTAATCATCTTTTCTTTGTTGTTGCAAGTGATGGCATATTTGAATTCCTGTCAAGCCAGACTGTTGTTGATATGGCAGCAAGTTATACAGATCCCCGTGATGCATGTGCTGCTATTGCTGAAGAGTCATATAAACTATGGTTGGAACTTGAGAACAGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGTCTCTCTAATTCAGGTACATCTGGAGTTGAATCAGATGAGGTCAGCATTGGTACAGTAATGGAGTCTAGGACAGGAACTCCAGAGACAGTTCCCACTGGATCTAATTTTTATCAGTCTGCAACGACCAGTCGCTCTGATTTGCAATCCTGTCAGCATGTAGCTTCAATGAGGACCCCAGCCGTAGTGGTTCACTCTCCAGCATGTCCTAGACCAATTGAATCTTGA 1266 0.4455 MGCVHGKYCCGNSSSSEDGSRDYREIGYFHGHRKNVLAQKSLKHASVPSRNFILEYTFLTQRGFYPDSPDKENQDSLCISTQIQGNPNVHFFGVYDGHGQFGSQCSNFVKDRLVDKLSNDPALLEDPVQAYTSAFLTTNHELHTSEIDDSMSGTTAITALVIDDTLYVANVGDSRAVLAVRDGNRIIAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPDIQNWGDEESRGGDPPRLWVPNGMYPGTAFTRSIGDSFAETIGVIAVPEVSTVQLTPNHLFFVVASDGIFEFLSSQTVVDMAASYTDPRDACAAIAEESYKLWLELENRTDDITIIIVQIKGLSNSGTSGVESDEVSIGTVMESRTGTPETVPTGSNFYQSATTSRSDLQSCQHVASMRTPAVVVHSPACPRPIES* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2178 421 SUPERFAMILY PP2C-like 46 347 IPR036457 -
Apr9g2178 421 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 34 402 - -
Apr9g2178 421 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Apr9g2178 421 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 34 402 - -
Apr9g2178 421 CDD PP2Cc 71 345 IPR001932 -
Apr9g2178 421 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Apr9g2178 421 Pfam Protein phosphatase 2C 76 324 IPR001932 -
Apr9g2178 421 Gene3D - 50 347 IPR036457 -
Apr9g2178 421 SMART PP2C_4 51 343 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2178 Apr-Chr9 29793493 29797192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2178 1 350 PP2C-type Phosphatase Gene Family AT3G06270 71.105 1.30e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2178 - - gmx:100797866 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2178 9 29793493 29797192 Apr1g1703 1 26711754 26715441 PCT