Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2172 ATGGCTTCCCCCACCCCTCCCTCTCCCTCAGATCCTCCCTCCGCCGTTCCCCTCGCCCTTCCCGTCGCCGCACCACCCTCCTCCCGCCGCCTTCCTCCGCCCTGCTGGTCCCCCGACGAAACCCTCGCCCTCATCGACGCCTACCGCGACAAGTGGTACTCCCTCGCCCGCGGTAACCTCAAAGCCACCCACTGGCAAGAGGTCGCCGACGCCGTCGCCCACCGTTGCCCCAACGCTTCCCCTCCTAAAACGCCCGTTCAGTGCCGCCACAAGATGGAGAAGCTCCGCAAGCGCTACCGCACCGAGATCCAGCGTGCTCGCTCCCTCCCCCTCTCTCGCTTCAACTCCTCCTGGGTCCACTTCAAACTCATGGATTCCATGGAGAAAGGTCCCTCCCCTGTCAAACCCCAAAACGATTCTGACAGTGCCGACGACGACGACGACGATCACGATCCCTTTCAGGATATCCACAACAACAACGCTGGTCATGGATCTAACACGAGGAGCTTAAACAAGTTGTATAGGAACGGGTTTGGGGGTTCTGGTGGCCCTGGGTTTAGGATTCGAATTCCCACTGCGCCCAAGATGTTTCCGAATCAGAAATTTAACCCTAATTTGAATCAAAACCCTGCCTCTAATTTTGGGGCGAAGAAGAGGGACCCCGTGGGTGAAGTGGTGTCTGCGATTAAGGTTCTTGGAGACGGCTTCGTGAGGATGGAACAGATGAAGATGGAGATGGCGAGGGAGATTGAGACCATGCGGATGGAGATGGAAATGAAGCGCACTGAGATGATTCTCGACTCTCAACACCGAATCCTCGAGGCCTTCGCTAAGGCCCTTTCTGACAACAACAAGAAGCCTAAGACTGTCCCTTCTCCCCAACAACCTTAA 891 0.5701 MASPTPPSPSDPPSAVPLALPVAAPPSSRRLPPPCWSPDETLALIDAYRDKWYSLARGNLKATHWQEVADAVAHRCPNASPPKTPVQCRHKMEKLRKRYRTEIQRARSLPLSRFNSSWVHFKLMDSMEKGPSPVKPQNDSDSADDDDDDHDPFQDIHNNNAGHGSNTRSLNKLYRNGFGGSGGPGFRIRIPTAPKMFPNQKFNPNLNQNPASNFGAKKRDPVGEVVSAIKVLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILDSQHRILEAFAKALSDNNKKPKTVPSPQQP* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2172 296 Coils Coil 89 109 - -
Apr9g2172 296 PANTHER TRANSCRIPTION FACTOR 3 292 - -
Apr9g2172 296 Pfam Myb/SANT-like DNA-binding domain 34 127 IPR044822 -
Apr9g2172 296 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 3 292 IPR044823 -
Apr9g2172 296 SMART 118neu2 43 132 IPR006578 -
Apr9g2172 296 MobiDBLite consensus disorder prediction 1 32 - -
Apr9g2172 296 Gene3D - 36 101 - -
Apr9g2172 296 MobiDBLite consensus disorder prediction 127 169 - -
Apr9g2172 296 ProSiteProfiles Myb-like domain profile. 36 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2172 Apr-Chr9 29754122 29755682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2172 3 127 Trihelix Transcription Factor Family AT3G14180 35.036 5.65e-18 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr9g2172 Myb_DNA-bind_4 1.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2172 - - gmx:121175207 393.275