Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2164 ATGCCTGATCAGAGAAAAAAGTCATCTGTAGATGTAGATTTCTTTACAGAATATGGAGAAGGGAGTAGATACAAAATAGAGGAAGTAATCGGTAAAGGAAGCTATGGTGTTGTTTGTTCTGCATATGATACGCACACCGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTATCTGATGCCACCCGCATTTTACGTGAGATCAAGCTTCTTAGACTCTTACGTCATCCCGATATTGTGGAGATCAAGCATATCTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTTATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTCCAGAGCATTACCAATTTTTTCTCTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAATTGAAGATTTGTGACTTTGGTCTTGCCAGAGTAGCTTTCAATGATACGCCCACTGCTATATTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCCATAGACATATGGAGCATTGGATGCATTTTTGCTGAACTTTTAACTGGAAAGCCTCTTTTCCCAGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTTGGAACACCATCTCCTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAAGAAGAAGCCGGTTCCTTTCTCCCATAAGTTTCCTAATGTTGATCCTCTTGCTCTTCGTGTTTTAGAAAGAATGCTGGCATTTGAACCTAAAGATCGACCCACTGCTGAAGAGGCTCTTGCAGATCCATATTTTAAAGGATTGGCAAAGGTAGAGAGAGAGCCTTCCGCTCAGCCAGTTACCAAAATGGAATTTGAATTTGAAAGGCGCAGGATAACAAAGGAAGATGTAAGAGAACTTATTTACCGAGAGATTCTGGAGTACCATCCGAAGATGTTAAAGGAACATCTAGAGGGAGAAGAACCAACAGGCTTCATGTATCCAAGTGCCGTGGATCACTTCAAGAAGCAATTTGCATATCTTGAAGAGCATTATGGAAAAGGTGGTACTATCACTCCACCTGAGAGGCAACATGCATCATTACCCAGGCCGTGTGTGTTGTATTCAGATAACTCAAGACAGAATGTGGCTGAGATTGCTGATGATCTATCCAAGTGTAGCATCAAAGAAGTTAAGAAGCCAGCTGTAGACAGGACTGGTGGTATCCCTATGAGCAGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGGCGTTGCTGCGCGGCCTGGAAAACTTGTGGATTCTGTATTGCGTTACAACAACTGTGGAATAGCAGAGGCTGAGCAGCGGAGGATGGTCAGGAATCCATCTGTTTCAGCCCAGTATGCTGCTTCAAGCTGTTCATATCCTAAAAGAAACGCAAGCTGTAAAAATGAGAGGACAGACGATGGGATTGAAGGTTCTAATGGACTTCAGCCAAAGCCTCAGTACGTAGCGCGAAAAGTTGCTGCTGCTCAAGGTGGAGCTGGTGGGAATTGGTGTTGA 1674 0.4217 MPDQRKKSSVDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFSHKFPNVDPLALRVLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEHLEGEEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTITPPERQHASLPRPCVLYSDNSRQNVAEIADDLSKCSIKEVKKPAVDRTGGIPMSRLPLQAPQNIQGVAARPGKLVDSVLRYNNCGIAEAEQRRMVRNPSVSAQYAASSCSYPKRNASCKNERTDDGIEGSNGLQPKPQYVARKVAAAQGGAGGNWC* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2164 557 SMART serkin_6 24 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2164 557 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 476 - -
Apr9g2164 557 ProSiteProfiles Protein kinase domain profile. 24 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2164 557 ProSitePatterns MAP kinase signature. 59 162 IPR003527 GO:0004707|GO:0005524|GO:0006468
Apr9g2164 557 ProSitePatterns Protein kinases ATP-binding region signature. 30 54 IPR017441 GO:0005524
Apr9g2164 557 Gene3D Phosphorylase Kinase; domain 1 39 360 - -
Apr9g2164 557 SUPERFAMILY Protein kinase-like (PK-like) 21 319 IPR011009 -
Apr9g2164 557 CDD STKc_TDY_MAPK 23 360 - -
Apr9g2164 557 Gene3D Transferase(Phosphotransferase) domain 1 110 338 - -
Apr9g2164 557 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 476 - -
Apr9g2164 557 Pfam Protein kinase domain 24 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2164 557 MobiDBLite consensus disorder prediction 515 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2164 Apr-Chr9 29682382 29688971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2164 2 556 MAP Kinase Gene Family AT5G19010 80.911 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Apr9g2164 Pkinase 3.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2164 - K04371 gmx:100799442 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2164 9 29682382 29688971 Apr1g1720 1 26868958 26875629 PCT