Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr9g2151 | ATGGCACAGCTAGTCGCAGTACTCACGACATGTTCACCTCAGTTTGTGTCGGTTCGGCGCATCGGAACTTGGAAACCATCGAACTCGCTCACAAAATGTCCAACCATTCCTTCACCATCATTTTCTGCCTCTCTTCGCTACGCACTGTTTTGCTGCAGAGCCTGCTCCAGTTCTTCTGTCGAATGCAATTTGCCTTCTTCAGCCAAAATCTTCATCAAAGGGCTTCCTCTCTCAACCTCCAAAGGACGTTTGATGAAGGTGTTTTCAGAGTTTGGCGAAGTCAATCTAGTCCAGCTTCCGATAGATAGAGAAAGTGGGCAGTCTTTAGGATTTGCATATATTTGGTTTGCCAAGGAAGAGTGTGCACAATTGGCTGTGAAAGAGATGAATGGAAAGTTTTTTGATGGCAGGTTTATTTATGTTACAATTGCAAAGCCCGGATCATCAAAAAGATCGAAGGGGACAACACCCTACAAATTTTAA | 483 | 0.4431 | MAQLVAVLTTCSPQFVSVRRIGTWKPSNSLTKCPTIPSPSFSASLRYALFCCRACSSSSVECNLPSSAKIFIKGLPLSTSKGRLMKVFSEFGEVNLVQLPIDRESGQSLGFAYIWFAKEECAQLAVKEMNGKFFDGRFIYVTIAKPGSSKRSKGTTPYKF* | 161 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr9g2151 | 160 | SMART | rrm1_1 | 69 | 142 | IPR000504 | GO:0003723 | |
Apr9g2151 | 160 | Gene3D | - | 56 | 159 | IPR012677 | - | |
Apr9g2151 | 160 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 68 | 146 | IPR000504 | GO:0003723 | |
Apr9g2151 | 160 | PANTHER | RNA-BINDING MOTIF PROTEIN, X-LINKED 2 | 44 | 160 | - | - | |
Apr9g2151 | 160 | SUPERFAMILY | RNA-binding domain, RBD | 57 | 152 | IPR035979 | GO:0003676 | |
Apr9g2151 | 160 | PANTHER | GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 | 44 | 160 | - | - | |
Apr9g2151 | 160 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 70 | 139 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr9g2151 | Apr-Chr9 | 29605396 | 29607572 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr9g2151 | 70 | 159 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 30.000 | 2.50e-06 | 44.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr9g2151 | - | - | gmx:100791917 | 206.453 |