Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2150 ATGAACATGTTATCGGTATCAGCTTCGTGCAAGCCCCTAGTGATAAATTTGGAAGCGAGGAAGTCCTTGTCGTTGTTCCACCACCGGAACCGGAAGGAGAAGGCGGTGGTGATCATGGGGGCGACGGGGACGGGGAAGTCGAAGCTGGCAATAGACGTGGCCACACAATTGCCACCAGCAGAGATAGTGAATTCGGACAAAATGCAAGTGTACGAGGGTCTTGACATCACCACCAACAAAGTTACCGAGGAAGAGTGTCGCGGGGTCCCACACCATCTCTTAGGCACGGTCCATCCTCACTCCAATTTCAGTGCCAACGACTTTTGTCACCACGCCACTCTGGCCATTGGTTCAATCTCGAAGAGGGACGCTTTACCCATCATTGCGGGTGGGTCCAACTCCTTCATTGAGGCGTTGGTCAACCACCACCCTGAGTTTGGGTTCAGGTACCAGTGCTGCTTCCTCTGGGTCGATGTCTCCCTCCCAGTTCTCCATTCATCTCTTTCCGCACGTGTCGACCGCATGATTCAGGGTGGCCAGGTGGACGAGGTTCGTCCCTTTTTCGACCCATCCGATGAAGACTACACTAGAGGGATACGAAAAGCCATTGGGGTCCCTGAATTTCATCACTTTTTTCAAGCCGAAGCCGATCAAGCCGATGACGGGACCAAGAAGAGGCTCCTCGAGGCTGCCATTCGTGCCATCAAAGCCAACAACTGCAAGCTTGCCACCCGACAGCTCCAGAAGATTCATCGCCTTCACTCCTTGTGGAAATGGAATATGCACCGCCTTGACGCCACCGAGGTCTTCCTCAAGAGTACTCCCGAGGAGGCAGAGGAGGCTTGGGAGAATCACGTTATGGCCAAGACCCGTAGGATCCTTCACAAGTTTCTCTATGAGGATACGCATGTTCACGCCGGTATTACTTCCGTTGTTTCTTCGCCGCCGCCAGCCATGGCCGCCGCCACCCATTAG 975 0.5405 MNMLSVSASCKPLVINLEARKSLSLFHHRNRKEKAVVIMGATGTGKSKLAIDVATQLPPAEIVNSDKMQVYEGLDITTNKVTEEECRGVPHHLLGTVHPHSNFSANDFCHHATLAIGSISKRDALPIIAGGSNSFIEALVNHHPEFGFRYQCCFLWVDVSLPVLHSSLSARVDRMIQGGQVDEVRPFFDPSDEDYTRGIRKAIGVPEFHHFFQAEADQADDGTKKRLLEAAIRAIKANNCKLATRQLQKIHRLHSLWKWNMHRLDATEVFLKSTPEEAEEAWENHVMAKTRRILHKFLYEDTHVHAGITSVVSSPPPAMAAATH* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2150 324 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 161 261 - -
Apr9g2150 324 Pfam IPP transferase 149 248 - -
Apr9g2150 324 Pfam IPP transferase 69 143 - -
Apr9g2150 324 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 24 305 IPR039657 -
Apr9g2150 324 Gene3D - 32 298 IPR027417 -
Apr9g2150 324 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 24 305 - -
Apr9g2150 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 145 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2150 Apr-Chr9 29594170 29595144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2150 149 302 C2H2 Transcription Factor Family AT2G27760 31.111 1.12e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2150 K10760 - gmx:100778430 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2150 9 29594170 29595144 Apr1g1728 1 26979054 26980716 PCT