Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2143 ATGGAAAAATCAGGAATGGCCGCGTCAGCAGCCATGGATCAATTTGACAAATCCATGAAGAAACAAATAGAAGCAATTGCACGGGTTTTGCACTTAGTTAAATCCTACAAAGAGGACTGTATTTCGTGCAAAATCGACGAGGGTCTGTATTTGGGTTCCGTTGGCGCTGCAACTAACAAGTTTGCTTTGAAAAAGTTTAATATTACTCACATTTTGACTGTGGCTGGTAAATTGCCACCTGCACATCCTGGGGATTTTGTCTATAAAGTTATAGACGTTGCTGACAGAGAAGATGTCAACTTAAAACAATACTTCAATGAGTGCTTTGATTTTATTGATGAAGCCAGAAGACACGGTGGAGGTGTTTTGGTTCATTGTTTTGCTGGAAGATCAAGGAGTGTGACTGTAATTGTGGCATATCTGATGAAGACTCGTGGAATGTGCTTTTCTGAAGCTCTGCGATATGTAGAGAGCAAACGACCAGCGGCATCTCCCAATCGCGGTTTCATTGATCAGTTGAAGGACTTCGAGAAATCTCTTCAAGGTGCCCCTAAATTGCATTAG 564 0.4167 MEKSGMAASAAMDQFDKSMKKQIEAIARVLHLVKSYKEDCISCKIDEGLYLGSVGAATNKFALKKFNITHILTVAGKLPPAHPGDFVYKVIDVADREDVNLKQYFNECFDFIDEARRHGGGVLVHCFAGRSRSVTVIVAYLMKTRGMCFSEALRYVESKRPAASPNRGFIDQLKDFEKSLQGAPKLH* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2143 187 ProSiteProfiles Dual specificity protein phosphatase domain profile. 40 182 IPR020422 GO:0006470|GO:0008138
Apr9g2143 187 Gene3D Protein tyrosine phosphatase superfamily 43 187 IPR029021 -
Apr9g2143 187 Pfam Dual specificity phosphatase, catalytic domain 49 178 IPR000340 GO:0008138|GO:0016311
Apr9g2143 187 SMART dsp_5 41 179 IPR020422 GO:0006470|GO:0008138
Apr9g2143 187 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 4 183 - -
Apr9g2143 187 PANTHER BNAA01G23680D PROTEIN 4 183 - -
Apr9g2143 187 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 43 183 IPR029021 -
Apr9g2143 187 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 161 IPR000387 GO:0016311|GO:0016791
Apr9g2143 187 CDD DSP 43 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2143 Apr-Chr9 29519835 29522417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2143 44 182 Protein tyrosine phosphatase (PTP) family AT3G06110 60.432 3.95e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2143 - - aprc:113847529 377.867