Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2121 ATGGATTGTGACGAACCTCCTTGTCCCTCTCCCTATCCCTATTCCCATTCTTCTTCACTTCTCAAAGACATCTCCAACTTCACAACCCCCAGACGCCCCCCTCCCTCCCTCACCGCCCAATCTCCTTCCACCCAATTCTTCACCGCTTCCAAACCCGCCTCCTCATTCCACCGCCGCGCCAAGAAGTCTTCTACCGCCGCCAAAAAACTCAAGGCCTTCCAATTGGAGCGGTCCCAATCCTCTAGAAAGGCCCAAATCAGAAAGGAACACTCCCTCAAATCCCTAGCGAAGTCCCTCTCCGTTTGGCTCAACTTCTTGCTCCAAAACCCCGCCTCCTGCGGCTGCGACTTCTCCATCGCCGGACTACACGTGGCCGATCCCACTCCCGCCACCCGCGGTAAGAGAGATGGCGCTCCGGGAATCTCCATCGGAGTCGATTCCACGTGGCGAACTCCCAAGCGACAGAGGAAGACGTGGTCCTCTTCACGCGCCGGTAAGGAAAATTCCGAGACGCAGTTGCCTGATTCCTCGTTTTCGTACTTGAGGGATTCTCTGAAGGATGTCTGCAGTTTCGACGATTTGAAGCAGCGAATGAGGGTTTATCTCAGTCTCACAACTTGTAAAGAGATCTTCCAAGTGATGAATCACGTCACCAAGACGATTGACGACGGAAGGCTAAATATGAAGGCACACTGCCCTGTAGTAACCGATGTTGGGTTGAAGGATAAGGCCACTAGGATTCTCATGTGTTATAATTCAATTTGGCTGCGGATTGGATTATACATAATTTTTGGGGGTGACTGCTTGGTGTTAAATTGTGATATTGATTCTGATCAAGATGCTGTATTCTTGAAAATGGTCATTGAGAAGCTGTTTTTTTCGCATGAGGGATTAGCAAAAGCATATGCTTATAACAAGATGGTTGAAGGAGTCTATAGGTCAGGTTACTATGAGAATTTGGGGAATGTGATTTTGAAGAAGGTTTTGTTGCTTGTGCTTATCCTTGATAAAGCTAAATGCCAGAGTTACCTCCCACTCGAGTATGGTATTGATGGATTAGACGGGGGTTCCCCTTTATTATTCAAAGCTGAATCCTGGATTAAATCAAGTAGTCAACTGATCCATGAATTTCTATCGTCTGATGTGATGCATGGAGAAGGAAATCTTCTAGCACATTTGGTGATTTTAGGTTACAAATTATCTCACCAACAGGGACTTCTTGTTGAGTATGATTTCAGGGTTAGAGATTTATTTGTAGATCTTCAAGATGGACTCAAACTGTGTAGAGCTATTCAGCTCTTGCAGAATAATTCTTCGATCCTTATGAAAATCATAGTTCCCTCTGATGCTCCTAAGAAAAAACTTGCCAACTGTGGTCTTGCCCTACAATATCTCAGGCAAGCTGGTGTATCACTAGTTGACGAAGATGGCATCATGATTGTGACAGATGATATTGTTAATGGAGATAAAGAACTTACGCTTTCCTTGCTCTGGAATATGTTTGTTCATTTACAGCTACCTCTTTTGGTTGATAAAACAAGTTTAGTTGGGGAGATTTCAAAAATTCACGGACCGGGCATGGATCTCATAAACAGTACAAACTCTAGTTCTCTGGAGTTGCTTTTGAATTGGATTCAGGCTGTTTGTGACAATTATAATTGTGCTATTGACAATTTTCATTCCCTTGTTGATGGCAAAGCTATCTGGTGCTTACTTGATTACTACTTCCAGAAGGAACTTCATAATTCCTGTTCAATGAAGGAAGTTTATCAGAAAAGTGGCAAGGCATCAATTATGTCAGTCAATGAATATTCAGATGCACTTTATAATTTTATATTATCCCAGAAGTTGACTACATTACTGGGGAACTTTCCAGAGGTACTTCAAATAAGTGAGCTACTTCAATATAATGGTGCTTGCAATGATCGAAGTGTGGTGATACTGTTGGTTTTCCTAGCTAGCCAATTATTTGTCAAGAAAAATGTGGATCACTTAAATTTTCATAAGCTCTTGGGTTATGATTGCCAAAGTCCAAACCGTAGACATTTGAGGATGGTACAATGCATTTCAAGTTCTGAAGCAGCACAAAATCCTGATGCTTCAGATGTGCATGGCAATGAAGATGCTGCTAGAAAATTCAAGGCCATCCAAGCTTGGTGGCAAGATATGGCTGAACGAAACCATATCATCAAACCAGTTATCTCTAGTTTACAGAGATCCAGGAGCACTGAATGCAACACCAACATTAGAAGAGAAAATGCTGCAAGAACAATACAACTGCATATCAGAGGATTGGTTGTACGGCGCAAGTTTGTGAAGATGGTAAAAGCTGCTACCCTTTTGCAAACTGTTTTGAGAGCTTGGCTAAAAGTGAGGAAAGAGTCAATGTGCAGTATATTCCCAACCGTTCAAGTTTACAGCTTCTCATGTGAAACATTGGAGCAACCAGAAACATATAAGAGATATGCCATGCTTTTCATTCATAGGCATTCCTTTTTGAAATTGAAGAGGTCAGCACAGCTTATCCAGCAAGCAGTGAGGGGTTGGCTCTATTGGAGGCATCAGCAACAATGTCGGTTAAGTCCTGATCTTTTGATATCAGATATGGGGGTAGCTGCTATTACTGTACAGAAATTTGTTCGTGGTTGGATGGCACGATCTAGATATATTCATCAGCTTGATCAGAAAGACAAAACTTTAAATTTAGCCCAGCAGAAAGTTAATTTTGATCTTCAAACAAATGCAGCCATTATCATTCAGCTTGCTTGGAAAAAGTTCTTATGCTTTGAGTCTACTCAGAAGCAGCACTTCCATGCAACTAAAATTCAACGAAGCTTCCGTAGGTGGCTGTTGAGAAAAAGTTTTTTAAATCAGACTCAAGCTGTCATAAAAATTCAATCTTATTTTCGAATGTGGAGATGTGTAAATGCTTTTCAGCACTTCAAAATTGAGTTTAAGGCAGCTATTGTCATTCAATCTTCTTTACGAGGATGGATTGCACGGAAGGATGCTTGTGCACATAGAAATCACATCGTAGAAATTCAAAGGCATTGCCGTGGTTGGCTCCTGAAACGTGACTTTTTGTTCCAAAGAGATGCCGTAGTAAAGATCCAGTGTATCATTCGAAGCTTGAAATGCCAGAAGGTTCTCAAATGTGAGAAAGATGCTGCTTTGGAGATGCAGCGCTTTATCAGGGGTCATTTAACACGGAATCGGCTATTAGGTTGTGCTTCCAAGTCACGCACGCTTACTCCTGTCAGTTGCAGTTCAAGACCAGGTGGCTTTTGCAGTTTTCAACTGGAACTATTCTTGTTTTCAGTTGTGAAATTGCAACGATGGTGGAAGGGTTTGCTGTTGCTTAAATTAATGAATAAATCAGCCATCATTATTCTGTCATGTACTCGTGGGTGGATAGCCAGGCGAAAGGCCACTCTTTACAGACGCCATGTTGCCATCCGTGTACAGAACCAAAGATATGCCGCGCTGGAAATTCAACGCTTTATTAGAGGGCATTTAATTCGAAATCGGATATCAGGCGGTACTTCTAAGCTACGTGCATTTCAAGATGTAGGTCACATTTCAAGACCAGTTGCCTATTGTAGTTCGCAACTGGAACTATTTTTGTTTTCTGTTGTAAAATTGCAACGATGGTGGAAAGGTGTCTTGTTACAGAAATTGATGACAAAGTCTGCCATTGCTATTCAGTCTCATACTCGTGGGTGGATAGCCAGGCGAAAGGCCACTGAGCAAAGATATCGTATTATTATCATTCAATCCCACTGGAAAGGTTACCTTGCACGCAAAGAGCCAAAAGAACATTTATTGGATTTGCGCTTGAGAATGCAAAAGTCTGCCAGAAACGTGGATGACAGCAAGCGTCTCATAAACAGACTCTTGGCAGCGCTTTCAGAGCTGCTTAATATGAAGAGTCTTAGTAACATCCTTCACACTTGTTCAACATTGGATATGGCTACAGGACATTCTCAGAAATGCTGTGAAGAACTTGTGGCTGCAGGGGCCATCGACACCTTGCTGAGGCTTATTCAAACAGTCAGCCGGAGTATACCTGATCAGGAGGTTCTAAAGCATGCGTTGTCAACTCTCCGAAATCTCGCCTGCTATCCTCATCTTCTAGAAGTGCTTATCCATAATCACGGTTCCGTTCAGATAATCGTCTTGGAGTTACTGAGGAATAAAAATGAGGGCTATTTCATTGCTTCTGAACTTTTGAAGATGATGTGTTCCACAAGTATAGGCGTGGAGACGATACTCAGGTCCCCTGCCCTTCTAAAACGACTACACGGTCTTGTTGAAGAGCTTAAAAGAAAGGGAATTTACGAGAAAAGAAATCCTAGGGCTCCTAGTCCGGTTATCAAAGAAAACAGAGAGAGAAGATTGAAGGAGGCCGCTGAGATTCTGAAGCTGATAACAAGTGCCTGA 4440 0.4248 MDCDEPPCPSPYPYSHSSSLLKDISNFTTPRRPPPSLTAQSPSTQFFTASKPASSFHRRAKKSSTAAKKLKAFQLERSQSSRKAQIRKEHSLKSLAKSLSVWLNFLLQNPASCGCDFSIAGLHVADPTPATRGKRDGAPGISIGVDSTWRTPKRQRKTWSSSRAGKENSETQLPDSSFSYLRDSLKDVCSFDDLKQRMRVYLSLTTCKEIFQVMNHVTKTIDDGRLNMKAHCPVVTDVGLKDKATRILMCYNSIWLRIGLYIIFGGDCLVLNCDIDSDQDAVFLKMVIEKLFFSHEGLAKAYAYNKMVEGVYRSGYYENLGNVILKKVLLLVLILDKAKCQSYLPLEYGIDGLDGGSPLLFKAESWIKSSSQLIHEFLSSDVMHGEGNLLAHLVILGYKLSHQQGLLVEYDFRVRDLFVDLQDGLKLCRAIQLLQNNSSILMKIIVPSDAPKKKLANCGLALQYLRQAGVSLVDEDGIMIVTDDIVNGDKELTLSLLWNMFVHLQLPLLVDKTSLVGEISKIHGPGMDLINSTNSSSLELLLNWIQAVCDNYNCAIDNFHSLVDGKAIWCLLDYYFQKELHNSCSMKEVYQKSGKASIMSVNEYSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACNDRSVVILLVFLASQLFVKKNVDHLNFHKLLGYDCQSPNRRHLRMVQCISSSEAAQNPDASDVHGNEDAARKFKAIQAWWQDMAERNHIIKPVISSLQRSRSTECNTNIRRENAARTIQLHIRGLVVRRKFVKMVKAATLLQTVLRAWLKVRKESMCSIFPTVQVYSFSCETLEQPETYKRYAMLFIHRHSFLKLKRSAQLIQQAVRGWLYWRHQQQCRLSPDLLISDMGVAAITVQKFVRGWMARSRYIHQLDQKDKTLNLAQQKVNFDLQTNAAIIIQLAWKKFLCFESTQKQHFHATKIQRSFRRWLLRKSFLNQTQAVIKIQSYFRMWRCVNAFQHFKIEFKAAIVIQSSLRGWIARKDACAHRNHIVEIQRHCRGWLLKRDFLFQRDAVVKIQCIIRSLKCQKVLKCEKDAALEMQRFIRGHLTRNRLLGCASKSRTLTPVSCSSRPGGFCSFQLELFLFSVVKLQRWWKGLLLLKLMNKSAIIILSCTRGWIARRKATLYRRHVAIRVQNQRYAALEIQRFIRGHLIRNRISGGTSKLRAFQDVGHISRPVAYCSSQLELFLFSVVKLQRWWKGVLLQKLMTKSAIAIQSHTRGWIARRKATEQRYRIIIIQSHWKGYLARKEPKEHLLDLRLRMQKSARNVDDSKRLINRLLAALSELLNMKSLSNILHTCSTLDMATGHSQKCCEELVAAGAIDTLLRLIQTVSRSIPDQEVLKHALSTLRNLACYPHLLEVLIHNHGSVQIIVLELLRNKNEGYFIASELLKMMCSTSIGVETILRSPALLKRLHGLVEELKRKGIYEKRNPRAPSPVIKENRERRLKEAAEILKLITSA* 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 1007 1036 IPR000048 GO:0005515
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 1053 1082 IPR000048 GO:0005515
Apr9g2121 1479 Gene3D - 1122 1186 - -
Apr9g2121 1479 Gene3D - 870 935 - -
Apr9g2121 1479 Gene3D - 1226 1274 - -
Apr9g2121 1479 Gene3D - 750 797 - -
Apr9g2121 1479 Gene3D - 1031 1081 - -
Apr9g2121 1479 Gene3D - 936 983 - -
Apr9g2121 1479 Gene3D - 984 1030 - -
Apr9g2121 1479 Gene3D - 1281 1461 IPR011989 -
Apr9g2121 1479 ProSiteProfiles Calponin homology (CH) domain profile. 393 505 IPR001715 GO:0005515
Apr9g2121 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 909 1003 IPR027417 -
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 872 898 IPR000048 GO:0005515
Apr9g2121 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1207 1272 IPR027417 -
Apr9g2121 1479 MobiDBLite consensus disorder prediction 23 62 - -
Apr9g2121 1479 MobiDBLite consensus disorder prediction 23 52 - -
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 751 779 IPR000048 GO:0005515
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 1250 1278 IPR000048 GO:0005515
Apr9g2121 1479 MobiDBLite consensus disorder prediction 129 174 - -
Apr9g2121 1479 Pfam Armadillo/beta-catenin-like repeat 1328 1372 IPR000225 GO:0005515
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 1227 1254 IPR000048 GO:0005515
Apr9g2121 1479 PANTHER UNCHARACTERIZED 11 1151 - -
Apr9g2121 1479 PANTHER UNCHARACTERIZED 1147 1478 - -
Apr9g2121 1479 SMART arm_5 1328 1373 IPR000225 GO:0005515
Apr9g2121 1479 Pfam IQ calmodulin-binding motif 939 955 IPR000048 GO:0005515
Apr9g2121 1479 Pfam IQ calmodulin-binding motif 1228 1246 IPR000048 GO:0005515
Apr9g2121 1479 Pfam IQ calmodulin-binding motif 986 1003 IPR000048 GO:0005515
Apr9g2121 1479 Pfam IQ calmodulin-binding motif 1055 1073 IPR000048 GO:0005515
Apr9g2121 1479 Pfam IQ calmodulin-binding motif 1254 1269 IPR000048 GO:0005515
Apr9g2121 1479 Pfam IQ calmodulin-binding motif 1160 1176 IPR000048 GO:0005515
Apr9g2121 1479 Pfam IQ calmodulin-binding motif 1011 1027 IPR000048 GO:0005515
Apr9g2121 1479 Pfam IQ calmodulin-binding motif 959 978 IPR000048 GO:0005515
Apr9g2121 1479 Pfam IQ calmodulin-binding motif 872 889 IPR000048 GO:0005515
Apr9g2121 1479 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1339 1386 IPR000225 GO:0005515
Apr9g2121 1479 SUPERFAMILY Calponin-homology domain, CH-domain 330 579 IPR036872 -
Apr9g2121 1479 Pfam Calponin homology (CH) domain 413 503 IPR001715 GO:0005515
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 984 1013 IPR000048 GO:0005515
Apr9g2121 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 987 1059 IPR027417 -
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 1157 1186 IPR000048 GO:0005515
Apr9g2121 1479 Gene3D - 400 505 IPR036872 -
Apr9g2121 1479 SUPERFAMILY ARM repeat 1298 1400 IPR016024 -
Apr9g2121 1479 Gene3D - 532 657 IPR036872 -
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 1123 1151 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 1006 1028 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 773 796 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 911 933 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 1122 1144 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 934 956 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 983 1005 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 957 979 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 1226 1248 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 834 856 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 750 772 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 1052 1074 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 1156 1178 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 1249 1271 IPR000048 GO:0005515
Apr9g2121 1479 SMART iq_5 868 890 IPR000048 GO:0005515
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 935 964 IPR000048 GO:0005515
Apr9g2121 1479 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 11 1151 - -
Apr9g2121 1479 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1147 1478 - -
Apr9g2121 1479 ProSiteProfiles IQ motif profile. 958 987 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2121 915 1059 Myosins gene family AT1G04160 30.201 8.10e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2121 K16743 - gmx:100817636 1766.51