Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2118 ATGTATAGAATACTATCGACGCCGGCGTCAAAGTTCCGTCAGTTCCGGCGACTCCGCTCTCGAGCGAAAAGCGCGGCGACCGACGAGGAACACGCGTTCCAGATCCTATGGCGGTACCAGATCCTGGACCCGAACAGCGACATCGTAGCTTATTGGAACAGGGTGTTCCTTGTGACGAGCCTCCTCGCCCTCTTCGTCGACCCTCTATACTTCTACCTACCCACCGTTGGTGGCCCAGCGTGCTTGCAAGCAGACCCCAAACTCAGCATTCTCGTCACCATTCTCCGTTCCTTCGCCGACCTCTTCTACGTCCTCCACATGCTCATGAAGTTCCGCACCGCCTTCGTCGCCCCCAATTCTAGAATCTTCGGCCGCGGCGAACTCGTCACGGACGCCCGCGAAATCGCCATCCGTTACTTGAAGTCTGATTTTGTCATTGACCTCGCTGCCACCATCCCTCTCCCTCAGATCGTGATTTGGTTAGTCATTCCAGCGAGTAGTAAAGCAAGAACTGATCATGCCAACAACACCCTTGCCCTTTTCGTTCTTATTCAGTATGTTCCTAGGCTATTTCTTATCTTTCCTTTGAACCACCGTATTCAGAAAACCACTGGTGTTATTGCCAAGACTCCCTGGATTGGAGCTGCGTACAATCTTGTTCTCTATATGCTAGCTAGTCATATTACAGGAGCAACTTGGTATCTGTCGTCAATAGGGAGACAATTTAGCTGTTGGCAAACTCAGTGCAATCAAGAAAACAAATCACATACCCTGTCTTGCTTGCCTAGTTATCTTGATTGCAATAGTTTGAACCTCCCTGAAAGGGAATACTGGCTGAACATCACCCGTGTAATTAGCAAATGTGACGCCAAGAGCAAGATCAATATCAAATATAAGTTTGGGATGTTTGCAGATGCTTTTCTGAATGACGTTGTCACTTCCAGTTTTAAGGAAAGATATTTCTATTGTCTTTGGTGGGGTTTGAGAAATTTAAGTTCGTATGGACAGAATTTGGACACCACAACATACCTTCCGGAGACACTATTTTGTATCATCTTGTGCATTGCTGGATTAGTTCTCTTTTCACTATTGATTGGAAACATGCAGACGTACTTGCAATCGATGTCAGTTAGACTCGAAGAATGGAGGATTCGGAAAAGAGACACCGAGGAGTGGATGAGGCATCGCCAGTTACCACCAGATTTGCAGGAACGTGTCCGTCGTTTTGTTCAATACAAATGGCTTGCGACAAGAGGAGTTAACGAAGAGGCTATAATGCTTTCGTTACCTCTTGATCTTCGTCGAGAAATTCAACATCACTTGTGTCTTTCCCTTGTGCGGCGAGTCCCTTTCTTCTCACAAATGGACGATCAGCTTCTCGATGCCATTTGTGAACGTCTTGTGTCATCATTAAGCACAGAAGGCACCTACATATTTCGAGAGGGTGATCCAGTGGATGAAATGTTGTTTATCATTAGAGGGCAATTGGAGAGCTCGACAACGAATGGAGGAAGGTCTGGATTCTATAATTCCATAACACTAAGACCTGGTGACTTCTGTGGAGAGGAATTGTTGACATGGGCCTTAATGCCAAACTCAACCCTCAACCTACCTTCTTCGACTCGCACTGTCAAAGCCCTCACTGAAGTTGAAGCTTTTGCACTACAGGCAGAGGATCTGAAATTTGTTGCAGGTCAGTTCAAGCGCCTTCACAGCAAGAAACTTCAGCACGCGTTTAGGTATTATTCCCATCAATGGAGAGCATGGGGTACTTGCTTCATACAAGCTGCTTGGAGAAGGTATCAGAAAAGAAAGGCAACAAGGGAGTTATCCCTGAAAGAGGGTCTTTACTACATGGCAGTGCCTGAGAGTGATGAAAGTGGAAATTATGAGGATGATGAGATCGGGGAATCCTCAGGGAATGTGAAAAAGGTTCAAAACCTTGGTGCAACTGTTTTGGCCTCAAAGTTTGCTGCCAATACAAGGAGAGGGAACCATAAGCTACAAGGCAGTGACCCTGTGCCGCAATTGTTCAAGCCAGATGAACCTGATTTCTCTGTAGACAATGAGGAAGTTTAG 2079 0.4642 MYRILSTPASKFRQFRRLRSRAKSAATDEEHAFQILWRYQILDPNSDIVAYWNRVFLVTSLLALFVDPLYFYLPTVGGPACLQADPKLSILVTILRSFADLFYVLHMLMKFRTAFVAPNSRIFGRGELVTDAREIAIRYLKSDFVIDLAATIPLPQIVIWLVIPASSKARTDHANNTLALFVLIQYVPRLFLIFPLNHRIQKTTGVIAKTPWIGAAYNLVLYMLASHITGATWYLSSIGRQFSCWQTQCNQENKSHTLSCLPSYLDCNSLNLPEREYWLNITRVISKCDAKSKINIKYKFGMFADAFLNDVVTSSFKERYFYCLWWGLRNLSSYGQNLDTTTYLPETLFCIILCIAGLVLFSLLIGNMQTYLQSMSVRLEEWRIRKRDTEEWMRHRQLPPDLQERVRRFVQYKWLATRGVNEEAIMLSLPLDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIFREGDPVDEMLFIIRGQLESSTTNGGRSGFYNSITLRPGDFCGEELLTWALMPNSTLNLPSSTRTVKALTEVEAFALQAEDLKFVAGQFKRLHSKKLQHAFRYYSHQWRAWGTCFIQAAWRRYQKRKATRELSLKEGLYYMAVPESDESGNYEDDEIGESSGNVKKVQNLGATVLASKFAANTRRGNHKLQGSDPVPQLFKPDEPDFSVDNEEV* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2118 692 MobiDBLite consensus disorder prediction 662 692 - -
Apr9g2118 692 Gene3D Helix hairpin bin 375 442 - -
Apr9g2118 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 30 688 - -
Apr9g2118 692 SUPERFAMILY Voltage-gated potassium channels 44 373 - -
Apr9g2118 692 CDD CAP_ED 451 582 IPR000595 -
Apr9g2118 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 30 688 - -
Apr9g2118 692 ProSiteProfiles cAMP/cGMP binding motif profile. 451 581 IPR000595 -
Apr9g2118 692 Pfam Ion transport protein 51 378 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr9g2118 692 Gene3D - 56 374 - -
Apr9g2118 692 SUPERFAMILY cAMP-binding domain-like 381 576 IPR018490 -
Apr9g2118 692 SMART cnmp_10 451 582 IPR000595 -
Apr9g2118 692 Gene3D Jelly Rolls 449 569 IPR014710 -
Apr9g2118 692 Pfam Cyclic nucleotide-binding domain 474 561 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2118 Apr-Chr9 29362966 29366087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2118 20 692 Ion Channels AT5G14870 69.308 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2118 K05391 - gmx:100802812 1281.54