Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2112 ATGGGTTGTCACGGTAGCAAGCAGAAAAAATCAACAGAAGCAACCATTCTGGGGAAACCCTTTGAAGACATAAAGAAACACTACACTCTGGGGAAAGAACTGGGAAGAGGGCAATTTGGGATTACGTATCTCTGCACCGAGAATTCAAGTGGTCACACCTATGCCTGCAAGTCGATCTTGAAGAGGAAGCTGGTTTCCAAAGCTGACAAAGACGACATGAAGAGAGAGATTCAGATAATGCAGCATTTGTCTGGGCAACCCAACATCGTTGAATTCAAGGGTGCTTACGAGGATCGGTATTCGGTTCACCTTGTGATGGAACTCTGTGCTGGTGGTGAGCTTTTTGATCGAATCATTGCTCAGGGTCACTATTCTGAGAGAGCTGCTGCATCGCTTTGCCGAGCCATTGTGAATGTTGTGCACATTTGCCATTTCATGGGTGTTATGCACCGTGATCTCAAGCCCGAGAATTTTTTGCTTTCTAGCAAGGATGAGGATGCCACGCTCAAGGCAACTGATTTTGGGCTCTCTGTTTTCATTGAAGAAGGGAAGGTTTACCATGATATGGTAGGCAGTGCTTACTATGTTGCTCCTGAGGTATTGCGTCGTAGTTATGGAAAGGAAATAGATATTTGGAGTGCTGGCATCATATTGTATATTCTTCTGAGTGGTGTACCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTCAACGCCATATTGGAAGGTGAAATTGATTTTGTAAGTGAACCATGGCCATCAATATCAGACAGTGCTAAAGATCTAGTCAGGAAGATGCTAACGCAGGATCCAAAGAAACGGATTACTTCTGCTCAAGTTCTTGAACATCCATGGATGAGAGAAGGCGGAGAGGCATCTGATAAACCAATTGATAGTGCTGTTCTATCCAGAATGAAACAATTCAGGGCAATGAATAAGCTCAAGAAGCTAGCATTGAAGGTTATTGCTGAAAATCTATCAGAAGAGGAGATTAAAGGTCTCAAAGCAATGTTTGCAAATATGGACACTGACAATAATGGCACCATCACCTATGAAGAACTGAAGACTGGCTTGGCTCGAATTGGATCACGACTTTCTGAGGCTGAAGTGAAGCAACTCATGGAAGCTGCTGATGTTGATGGAAATGGGTCGATTGACTATATTGAATTCATCTCGGCTACAATGCATCGGCACAGACTTGAACGTGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGATAACAGTGGATATATTACAAGAGATGAATTGGAGACTGCTATGACCCAACATGGAATGGGTGATGAAGCAACAATAAAGGAAATAATCTCTGAGGTGGATACAGATAATGATGGGAGAATAAACTATGAGGAATTCTGTGCAATGATGAGAAGCGGAATGCCACACCAGGGACAGCTACTGTAA 1431 0.4277 MGCHGSKQKKSTEATILGKPFEDIKKHYTLGKELGRGQFGITYLCTENSSGHTYACKSILKRKLVSKADKDDMKREIQIMQHLSGQPNIVEFKGAYEDRYSVHLVMELCAGGELFDRIIAQGHYSERAAASLCRAIVNVVHICHFMGVMHRDLKPENFLLSSKDEDATLKATDFGLSVFIEEGKVYHDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGEIDFVSEPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFANMDTDNNGTITYEELKTGLARIGSRLSEAEVKQLMEAADVDGNGSIDYIEFISATMHRHRLERDEHLYKAFQYFDKDNSGYITRDELETAMTQHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQGQLL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2112 476 ProSitePatterns EF-hand calcium-binding domain. 342 354 IPR018247 -
Apr9g2112 476 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Apr9g2112 476 CDD STKc_CAMK 27 285 - -
Apr9g2112 476 SMART efh_1 440 468 IPR002048 GO:0005509
Apr9g2112 476 SMART efh_1 333 361 IPR002048 GO:0005509
Apr9g2112 476 SMART efh_1 369 397 IPR002048 GO:0005509
Apr9g2112 476 SMART efh_1 405 433 IPR002048 GO:0005509
Apr9g2112 476 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2112 476 ProSiteProfiles EF-hand calcium-binding domain profile. 437 471 IPR002048 GO:0005509
Apr9g2112 476 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2112 476 Gene3D Phosphorylase Kinase; domain 1 30 113 - -
Apr9g2112 476 Gene3D Transferase(Phosphotransferase) domain 1 114 293 - -
Apr9g2112 476 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 9 470 - -
Apr9g2112 476 ProSiteProfiles EF-hand calcium-binding domain profile. 329 364 IPR002048 GO:0005509
Apr9g2112 476 ProSitePatterns Protein kinases ATP-binding region signature. 34 61 IPR017441 GO:0005524
Apr9g2112 476 Gene3D - 294 468 - -
Apr9g2112 476 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Apr9g2112 476 SUPERFAMILY EF-hand 325 465 IPR011992 -
Apr9g2112 476 SUPERFAMILY Protein kinase-like (PK-like) 25 294 IPR011009 -
Apr9g2112 476 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
Apr9g2112 476 Pfam Protein kinase domain 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2112 476 ProSitePatterns EF-hand calcium-binding domain. 378 390 IPR018247 -
Apr9g2112 476 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Apr9g2112 476 Pfam EF-hand domain pair 334 394 IPR002048 GO:0005509
Apr9g2112 476 Pfam EF-hand domain pair 404 466 IPR002048 GO:0005509
Apr9g2112 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Apr9g2112 476 PANTHER SERINE/THREONINE-PROTEIN KINASE 9 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2112 Apr-Chr9 29223463 29227976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2112 15 476 EF-hand Containing Proteins AT4G04720 84.665 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr9g2112 Pkinase 1.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2112 K13412 - gmx:100816859 897.116