Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2089 ATGGACAAAGGATGGGGTCTTGCTCTTGATTCCTCTTCCTCCTTCCCATTCTTCTCTTCACCCTCTGCTGCGCCTACGCCTAACCACAACATGTTCAACACTTTCGGATTTCCAGCCAACCTTAGCCGCACCGCCACTTCTCCCTCACCGCCCTCCCATGAAAATCGGACGGTCGTCGGTGAAGTCGACTTCTTCTCCGATAGAAACGACTCATCGCCTCAACATGAACACATCAACATCAAGAAGGAGGTTTCTCCTCACCATGGAACCCCTCCCGAGTTTGATCTTCATGTAAATACTGGTTTGCAACTCCTTACTGCAAACGCTGGGAGCGATCAATCAACGGTGGATGACGGGGCTTCATCGGATGCTGAAAATAAACGTGCCAAGGTCACCGAGCTGGCACAATTGCAAGAGGAACTTCGACGCATAAATGCTGAGAACCAAAAGCTAAAAGAGATGCTCAGTCAGGTGAATAGTAATTACGATAACTTGCAAATGCGTTTTGCCATGTTAATGCAAGAGCAACAAAATCAACGTACTAAGAACATGGAGCATGAGGTTGTTCAAGGAAAAGTTGAGGAGACAAACCATGGGATTAGCAGAGGAATGTCTAGACAGTTCCTTGAGATAGGACCTAGTAGTGGTATAGGTGAAATAGACGATCAAGTATCTAATTCTTCTTCAGATGAAAGAACTCGATCAAGCACTCCTCAGGACAATAAAAATGAGAAGAATAAGAAAGAGATTGATCCAGACACGGAATCTCAAGGTTGGGACTCCAATAAGCATCACAAATTAAACCCTTCCAACGCTATCGATCAATCCACTCCGGAGGCCACTATGAGAAAAGCTCGTGTCTCAGTCCGTGCCCGATCAGAGGCATCCATGATCAGTGATGGGTGTCAATGGCGAAAATATGGACAAAAAATGGCTAAGGGAAACCCTTGTCCTCGAGCATATTACAGGTGCACTATGGCAGTTGGTTGCCCAGTTCGCAAACAGGTTCAACGTTGTGCGGAAGACAGAACAATTTTGATAACAACTTACGAAGGGACTCATAACCATCCACTACCTCCTGCTGCTATGGCCATGGCATCAACCACTGCAGCAGCTGCTAGCATGTTGCTATGTGGGTCAATGTCCAGTGCGGATGGAATAACGAATCCTAATTTGTTGGCAAGAGCTATTCTTCCTTGCTCTTCTAGCATGGCAACGCTTTCAGCTTCAGCACCATTCCCTACAGTGACACTGGACCTCACACACAACCCTAACACATTGCAGTACCAAAAACCCCAGGTCCCATTCCAGCTACCATTCCCATCGCAGCCTCAAAACACAGGGTCGGGACCCACACTAGCACTATTACCGCAGGTGATTGCACAGACACTCTATAGCCAATCCAAATTCTCTGGTCTTCAATTGTCTCAGGACGTGGGGTCTAATTCTCAAACTCCAAGACCGTCGTCGCTCGCTGAAACGGTTAGTGCCACCAATGCAGCCATCACACCCGATCCCAACTTTACTGCTGCACTTGCTTTTGCCATCTCCTCCATCGTTGGCGCCGCTCATCCAAATAACAATAACAATAACAATAGTCCCAATGTGATCAACAGTGCTACAATCAACAACTTTTTAGGAAACTAA 1647 0.4681 MDKGWGLALDSSSSFPFFSSPSAAPTPNHNMFNTFGFPANLSRTATSPSPPSHENRTVVGEVDFFSDRNDSSPQHEHINIKKEVSPHHGTPPEFDLHVNTGLQLLTANAGSDQSTVDDGASSDAENKRAKVTELAQLQEELRRINAENQKLKEMLSQVNSNYDNLQMRFAMLMQEQQNQRTKNMEHEVVQGKVEETNHGISRGMSRQFLEIGPSSGIGEIDDQVSNSSSDERTRSSTPQDNKNEKNKKEIDPDTESQGWDSNKHHKLNPSNAIDQSTPEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGTHNHPLPPAAMAMASTTAAAASMLLCGSMSSADGITNPNLLARAILPCSSSMATLSASAPFPTVTLDLTHNPNTLQYQKPQVPFQLPFPSQPQNTGSGPTLALLPQVIAQTLYSQSKFSGLQLSQDVGSNSQTPRPSSLAETVSATNAAITPDPNFTAALAFAISSIVGAAHPNNNNNNNSPNVINSATINNFLGN* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2089 548 MobiDBLite consensus disorder prediction 219 234 - -
Apr9g2089 548 Coils Coil 127 175 - -
Apr9g2089 548 MobiDBLite consensus disorder prediction 235 262 - -
Apr9g2089 548 Pfam WRKY DNA -binding domain 300 357 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2089 548 MobiDBLite consensus disorder prediction 108 127 - -
Apr9g2089 548 ProSiteProfiles WRKY domain profile. 293 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g2089 548 MobiDBLite consensus disorder prediction 263 282 - -
Apr9g2089 548 Gene3D WRKY domain 283 360 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g2089 548 MobiDBLite consensus disorder prediction 211 286 - -
Apr9g2089 548 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 41 532 IPR044810 GO:0003700
Apr9g2089 548 PANTHER WRKY TRANSCRIPTION FACTOR 6 41 532 - -
Apr9g2089 548 SUPERFAMILY WRKY DNA-binding domain 291 359 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g2089 548 SMART WRKY_cls 298 358 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2089 Apr-Chr9 29078158 29081162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2089 1 531 WRKY Transcription Factor Family AT1G62300 50.346 4.51e-146 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g2089 WRKY 5.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2089 - - gmx:100802124 654.44