Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2073 ATGGGGAAATCAGGGGGTAGAAAAAAGAAGGGTGGTTTGAATTCTTCAAACCAAGGTCACGTTGATAGTGTAGGTTCTGCTGCAGCCCCAACGGCTAATGGTGGGGTTGAGTTGGATTCATCTATCTTTTTGAAGAAAGCGCATGAGCTGAAGGAAGAAGGGAATAGAAGGTTTCTGAATCAGGATTATGCTGGTGCTCTTGAACAGTATGAGAATGCTCTTCGACTAACCCCCAAAACGCACCCTGAAACTGCTGTTTTTCACAGCAACAGGGCCGCGTGTTTGATGCAAATGAAGCCCATAGATTATGAAGCCGTGATTGCTGAGTGCACCATGGCGCTTCAGGTGCAGCCCCGTTTTGTCCGGGCTCTTCTCCGCAGGGCTCGGGCTTTTGAAGCCGTTGGCAAGTATGAAATGGCTTTGCAAGATGTGCAGTTCTTGTTGACAGCTGACCCTAACCACCGGGATGCTTTGGAGATTGCTCAGAGACTCAGGACTGCAGTGGGACCTCGCCAGGAAGCCCAGCAGGACCTCCACAGTCGCCCCTCCCCTGCTGCCCTTGGCGCTTCTGCGGTCCGTGGTGCCCCTATTGCTGGATTAGGGCCATGTTTGCCAGCTCGGCCTGCGCAGAAGAAGGGAGCAAATTCAGCCGTTGGATCAGTCTTGTCGCCTAATAATAACAAGCTAGACAAGTCCCAACCAGTTTTGCCAACTGAAAATGGTCCTGAGACTAAGTCCCAGTTGCCAAAACTGGCATTGAAGCCTTCAAATGGTTCTGCAAAGCCACGTAATCCTAAAAAGGAAGACCACAAGGAACAGTCATCTCATGCATCAGGTATACTTGGGAAGCATTCTGAGGTTGCAATTAAGTGGAGGCCATTGAAGCTTGTTTATGATCATGACATTAGGCTTGCCCAGATGCCAGTCAATTGCGGTTTTAGAGTACTAAGAGATATAGTGAGCAAAAGATTTCCATCGTCTAGTTCAGTTCTGATCAAGTATAAGGATAGTGATGGTGATTTGGTTACTATAACCTCTACCGATGAACTCAGACTAGCAGAGTCTAGTGTCGATAGCCATCTCCTGAAAGAACCAGAAGCAGATAAAAGTGATTCAGTTTCGATGCTGAGACTGCATATTGTTGAAGTTAGTCCAGAGCAGGAGCCACCTTTATTGGAAGAAGAGGAAGAAAAACCTGTTGAGAATGAAGGGACCAAAGGAGAAGAGAGTGGCTCTCATTCTTCCCTTGGTGAATCTGTATCTGAAGTTCCTGATACTGAGGTTGATAAGATAGGGAAGAATGCTCCAAAGGAAAAGTCTGGAGCCCCAGGAGATACTGAATGCAAAGAAGTGGAGATGGATGATTGGTTGTTCGAGTTCGCTCAGCTTTTCCGCTCACATGTTGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTTTGTTCTGAGGCACTTGAGGAAACAGTAACTAGTGAGGAGGCTCAGGATCTATTTGACAAGGCTGCTTCAAAGTTTCAGGAGGTGGCTGCTTTGGCATTCTTCAACTGGGGTAATGTTCACATGTGCGCTGCTAGGAAGCGGATCCCCCTGGACGAGTCTGCTGGGAAGGAGGTAGTGGCAGAACAGCTTCAAGTGGCTTATGACTGGGTCAAGGAAAAGTATTCTTTGGCAAGAGAGAAGTATGAGGAAGCACTCTTGATCAAACCTGACTTTTATGAGGGACTCTTGGCTCTGGGGCAGCAACAATTTGAAATGGCTAAACTTCATTGGTCTTTTGCACTTGCTAAGAAGATAGATCTATCAGGCTGGGATTCTAAGGAGACACTTCAACTCTTTGACAGTGCAGAGGAAAAGATGAAAGCTGCAACAGATATGTGGGAGAAGCTGGAGGAACAGAGAGCAAAAGAGCTAAAGGACCCAAATGCAACCAAGAAAGAAGAATTGTTGAGAAGAAGAAAGAAACAAGGAGGTGGTACTGAAGGTGAGCCTTCTAGTGTTGGAGGTCAGGGTGATATATCTGCCGAAGAAGCTGCAGAGCAAGCAGCAGTCATGAGATCACAGATTCACCTCTTCTGGGGTAATATGCTTTTTGAAAGATCCCAAGTTGAATGCAAATTGGGAATGAGTGGATGGAAGGAAAATCTGGATGCTGCAACTGAGCGGTTTAAGCTTGCAGGAGCTTCTGAGGCAGATATTTCGATGGTTCTAAAGAATCATTGCTCAAATGGAGATGCCAGAGAAGGAGATGATGAAAAGGTTGTGAACCCACAGCACAATAAGACTGGTAAACCGGAGATCAATAAGGCCAATCAAGTTAGAGATAAATGA 2343 0.4648 MGKSGGRKKKGGLNSSNQGHVDSVGSAAAPTANGGVELDSSIFLKKAHELKEEGNRRFLNQDYAGALEQYENALRLTPKTHPETAVFHSNRAACLMQMKPIDYEAVIAECTMALQVQPRFVRALLRRARAFEAVGKYEMALQDVQFLLTADPNHRDALEIAQRLRTAVGPRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPAQKKGANSAVGSVLSPNNNKLDKSQPVLPTENGPETKSQLPKLALKPSNGSAKPRNPKKEDHKEQSSHASGILGKHSEVAIKWRPLKLVYDHDIRLAQMPVNCGFRVLRDIVSKRFPSSSSVLIKYKDSDGDLVTITSTDELRLAESSVDSHLLKEPEADKSDSVSMLRLHIVEVSPEQEPPLLEEEEEKPVENEGTKGEESGSHSSLGESVSEVPDTEVDKIGKNAPKEKSGAPGDTECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKEVVAEQLQVAYDWVKEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLHWSFALAKKIDLSGWDSKETLQLFDSAEEKMKAATDMWEKLEEQRAKELKDPNATKKEELLRRRKKQGGGTEGEPSSVGGQGDISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMSGWKENLDAATERFKLAGASEADISMVLKNHCSNGDAREGDDEKVVNPQHNKTGKPEINKANQVRDK* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2073 780 MobiDBLite consensus disorder prediction 423 447 - -
Apr9g2073 780 Coils Coil 617 637 - -
Apr9g2073 780 Gene3D Tetratricopeptide repeat domain 44 171 IPR011990 GO:0005515
Apr9g2073 780 MobiDBLite consensus disorder prediction 747 763 - -
Apr9g2073 780 MobiDBLite consensus disorder prediction 216 253 - -
Apr9g2073 780 CDD PB1 294 363 - -
Apr9g2073 780 MobiDBLite consensus disorder prediction 384 447 - -
Apr9g2073 780 MobiDBLite consensus disorder prediction 637 663 - -
Apr9g2073 780 Pfam PB1 domain 291 382 IPR000270 GO:0005515
Apr9g2073 780 MobiDBLite consensus disorder prediction 637 677 - -
Apr9g2073 780 SUPERFAMILY CAD & PB1 domains 288 358 - -
Apr9g2073 780 SUPERFAMILY TPR-like 497 593 IPR011990 GO:0005515
Apr9g2073 780 MobiDBLite consensus disorder prediction 10 24 - -
Apr9g2073 780 MobiDBLite consensus disorder prediction 261 277 - -
Apr9g2073 780 ProSiteProfiles TPR repeat profile. 47 80 IPR019734 GO:0005515
Apr9g2073 780 Gene3D - 292 363 - -
Apr9g2073 780 SMART tpr_5 121 154 IPR019734 GO:0005515
Apr9g2073 780 SMART tpr_5 85 120 IPR019734 GO:0005515
Apr9g2073 780 SMART tpr_5 47 80 IPR019734 GO:0005515
Apr9g2073 780 ProSiteProfiles PB1 domain profile. 291 383 IPR000270 GO:0005515
Apr9g2073 780 SMART PB1_new 291 383 IPR000270 GO:0005515
Apr9g2073 780 MobiDBLite consensus disorder prediction 208 279 - -
Apr9g2073 780 SUPERFAMILY TPR-like 44 178 IPR011990 GO:0005515
Apr9g2073 780 ProSiteProfiles TPR repeat profile. 121 154 IPR019734 GO:0005515
Apr9g2073 780 MobiDBLite consensus disorder prediction 746 780 - -
Apr9g2073 780 PANTHER - 1 765 - -
Apr9g2073 780 PANTHER PROTEIN CLMP1 1 765 IPR044517 -
Apr9g2073 780 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2073 Apr-Chr9 28950513 28953741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2073 44 165 Calmodulin-binding Proteins AT3G25230 30.827 3.78e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2073 - - gmx:100786963 1307.74