Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2072 ATGAAGCTCGACGCCTCCAATGGCCAGATGTCCTTCGCCGCCGACGTTTCGCCGCCGCAGGACCATGGCGACGCCGAGGAGATATTCGTCCCGCCGCTCAACTTCGCCATGGTGGACAATGGCATTTTTAGGTCTGGCTTTCCCGATTCTGCCAACTTCGGATTCTTGAAATCCCTCCGCCTCCGTTCCGTAATATGTCTGTGCCCCGAGCCGTATCCAGAAACCACTTCGGAATTTTTGAAGGACAACGGAATAAGGCTTTATCAATTCGGGATCGATGGCTGTAAGGAACCCTTCGTCAACATTCCGGAGGATACAATTCGTGAAGCTTTGAAAGTAGTCCTTGATGTTAGGAATCAACCCCTGTTGATTCATTGTAAACGAGGAAAGCACCGCACTGGTTGTCTCGTGGGATGCATAAGAAGATTGCAGAGGTGGTGTCTATCATCTGTTTTTGATGAATACCAAAGGTTTGCAGGTGCCAAAGCCAGAGTGTCAGACCAGAGGTTCATCGAATTGTTTGATATCTCTTATTTGAAGCACTATCCACTGTCATTTTCATGCTCAAGGAAATAG 576 0.4844 MKLDASNGQMSFAADVSPPQDHGDAEEIFVPPLNFAMVDNGIFRSGFPDSANFGFLKSLRLRSVICLCPEPYPETTSEFLKDNGIRLYQFGIDGCKEPFVNIPEDTIREALKVVLDVRNQPLLIHCKRGKHRTGCLVGCIRRLQRWCLSSVFDEYQRFAGAKARVSDQRFIELFDISYLKHYPLSFSCSRK* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2072 191 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Apr9g2072 191 Gene3D Protein tyrosine phosphatase superfamily 28 178 IPR029021 -
Apr9g2072 191 MobiDBLite consensus disorder prediction 1 21 - -
Apr9g2072 191 CDD PFA-DSP_Siw14 29 175 - -
Apr9g2072 191 ProSiteProfiles Dual specificity protein phosphatase domain profile. 34 188 IPR020422 GO:0006470|GO:0008138
Apr9g2072 191 PANTHER - 15 190 - -
Apr9g2072 191 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 176 IPR029021 -
Apr9g2072 191 Pfam Tyrosine phosphatase family 30 181 IPR004861 -
Apr9g2072 191 PANTHER TYROSINE-PROTEIN PHOSPHATASE 15 190 - -
Apr9g2072 191 PRINTS Plant and fungal dual specificity phosphatase signature 29 46 IPR020428 GO:0016791
Apr9g2072 191 PRINTS Plant and fungal dual specificity phosphatase signature 66 79 IPR020428 GO:0016791
Apr9g2072 191 PRINTS Plant and fungal dual specificity phosphatase signature 85 99 IPR020428 GO:0016791
Apr9g2072 191 PRINTS Plant and fungal dual specificity phosphatase signature 102 116 IPR020428 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2072 Apr-Chr9 28945618 28948811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2072 11 191 Protein tyrosine phosphatase (PTP) family AT4G03960 69.519 2.48e-97 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2072 K18045 - gmx:100785520 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2072 9 28945618 28948811 Apr9g2072 9 28945618 28948811 ECH