Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2068 ATGGCGGGTTCATGTTTCCATGCGCTTCGTTTGAGGAGGTTCAAGAGCAAACCTTTGCCTGAACCTTCTTCTTCTTCCAAGACCCGGTTGGATTCTGACTTAGAGAACATGGAAAGAAGAAGATTTGATAGCTTGGAATCATGGTCCATGATATTGGACTCTGAGAATGTGGAAACATGGGAAGCTTCAAAGGAAGATCAAGAAGAATGGACCGCTGATCTTTCCCAACTTTTCATTGGTAACAAGTTTGCATCTGGGGCTCATAGTAGAATTTACCGTGGAATTTACAAGCAGAGAGCCGTTGCTGTGAAAATGGTGAGAATTCCAACTCAGAACGAGGAGAGAAGAGCCTTGCTAGAGCAGCAATTCAAGTCTGAAGTGGCTTTGCTTTCACGTCTCTTTCATCCTAACATAGTGCAGTTTATTGCAGCTTGTAAAAAACCGCCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAACACTGAGGATGTATCTGAACAAGAAAGAGCCGTACTCTCTATCGATAGAAACTATACTAAGGTTAGCTCTTGACATATCAAGGGGTATGGAATACCTTCATTCACAAGGTGTGATTCACAGAGACCTCAAGTCAAATAACTTGCTTCTCAATGATGATATGAGGGTTAAGGTGGCAGACTTTGGAACGTCATGTCTTGAAACACGGTGTCGCGAGACCAAAGGAAACATGGGAACTTATCGTTGGATGGCACCAGAGATGATTAAGGAAAAGCCTTATACTCGTAAAGTTGATGTCTACAGTTTTGGAATTGTTCTTTGGGAACTCACTACTGCTCTACTTCCTTTCCAAGGAATGACCCCTGTGCAAGCTGCTTTTGCTGTTGCTGAGAAGAACGAAAGGCCTCCATTTCCAGCTAGTTGTCAGCCAGCACTTGCCCATCTCATAAAGCGTTGTTGGTCAGCAAACCCTTCGAAGAGGCCAGATTTCAGTGATATTGTGTGTACTCTTGAGAAGTACGATGAGTGTGTTAAAGAGGGCCTACCTCTCACTCATCATTCAGCCCTTGTCAGCAAAAACGTCATTATTCAACGCTTAAAAGGCTGCGTCTCGATGACCTCTTCCATACCTGTACAGGCTTGA 1125 0.4364 MAGSCFHALRLRRFKSKPLPEPSSSSKTRLDSDLENMERRRFDSLESWSMILDSENVETWEASKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQNEERRALLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDDMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPFPASCQPALAHLIKRCWSANPSKRPDFSDIVCTLEKYDECVKEGLPLTHHSALVSKNVIIQRLKGCVSMTSSIPVQA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2068 374 CDD STKc_MAP3K-like 84 328 - -
Apr9g2068 374 Pfam Protein tyrosine and serine/threonine kinase 79 330 IPR001245 GO:0004672|GO:0006468
Apr9g2068 374 Gene3D Phosphorylase Kinase; domain 1 66 159 - -
Apr9g2068 374 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 10 362 - -
Apr9g2068 374 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 362 - -
Apr9g2068 374 PRINTS Tyrosine kinase catalytic domain signature 155 168 IPR001245 GO:0004672|GO:0006468
Apr9g2068 374 PRINTS Tyrosine kinase catalytic domain signature 193 211 IPR001245 GO:0004672|GO:0006468
Apr9g2068 374 PRINTS Tyrosine kinase catalytic domain signature 239 249 IPR001245 GO:0004672|GO:0006468
Apr9g2068 374 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672|GO:0006468
Apr9g2068 374 PRINTS Tyrosine kinase catalytic domain signature 302 324 IPR001245 GO:0004672|GO:0006468
Apr9g2068 374 Gene3D Transferase(Phosphotransferase) domain 1 160 358 - -
Apr9g2068 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Apr9g2068 374 SMART serkin_6 77 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2068 374 ProSiteProfiles Protein kinase domain profile. 77 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2068 374 SUPERFAMILY Protein kinase-like (PK-like) 55 331 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2068 Apr-Chr9 28924554 28928985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2068 1 365 MAP Kinase Kinase Kinase AT1G62400 84.000 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Apr9g2068 PK_Tyr_Ser-Thr 2.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2068 - - gmx:100799437 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2068 9 28924554 28928985 Apr1g1821 1 27925089 27930430 PCT