Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2042 ATGGAATTTCAACCTTCCTTTTTGGTTATTGCCTCATTACTCATCTTGGTGATTTGGCTTTCAAAGATTTGTAAGCAGAAAGTCAAAGGGGAGAGTGTGGTTCATAATAAGATACCCCCAGGGCCACGGAAGCTGCCTCTAATAGGGAACCTGCATCAAATGGCAAGAGCAGGCACACTTCCACATCATACTCTTCAAAATCTAGCCCACAAATATGGACCCTTAATGCACCTCCAACTTGGGGAAATTCCTGCAGTGGTTATATCATCCCCCGAAATGGCCAAGGAGGTGATGAAGACACATGATCTTACTTTTGTTGATAGGCCACAACTCCTTTGTCCTCAAATTCTGGCCTATGGATCAACGGATATTGCCTTTGCTCCCTACGGTGATTACTGGAGACAGATGAGGAAAATATGTACCTTAGAGCTTCTCAGTGCCAAAAGGGTTCAATCATTCTCCTATATCAGAGAAGATGAGGTGGCTAAGCTCATACGATCCATTCATCTGTCTGCATCTGCGGGTTCACCAGTCAATGTTAGTAAAAGTGTTTTCTCTTTGGTAAGTACTTTTGTTACAAGGGCAGCGTTTGGCAAGAAATCTGAGTATGAAGATGAGCTTTTGACTTTGCTCAAGAAAGCAGTGGAACTAGCGGCAGGCTTTGATCTCGATGACTTGTTCCCTTCAATGAAACCTATTCATCTCATTACTCGGATGAAAGCTAAATTGGAGAACATGCAAAAGAAGCTGGACAAGATTTTAGAACACATTCTCAAGGAGCACCAATCAAACCATGACAACAGTGAAGCAAAAGAAACTCTCGTTGATGTTCTTTTGCGCGTGCAACAAAGTGGAAGCCTAGAGATCCCAGTCACACTCAACAACATCAAAGCCGTGATATGGGACGTATTCGTTGCTGGGTCTGATAGTTCATCAACAATACTTGAGTGGGCTATGTCAGAGCTGACGAAAAACCCATTAGTGATGAAAAAGGCACAAACTGAAATAAGAGAAGCTTGTAGAGGAAAGAAAATAATTAGCGAGGCAGATCTACATGAACTTGGGTACTTGAAGTCAGTGATCAAAGAAACCATGAGGTTACATCCACCTGCTCCTTTGTTGCTGCCAAGGGAATGTAGAGAAGCGTGCAAGATAGGTGGGTATGAAATACCAATGAAGACTAAGGTGATAGTAAATGCTTGGGCACTTGGAAGGGATCCTAAGCATTGGTATGATGCGGAGAAGTTTATACCTGAGAGATTTCATGGGAGCGGTGTTGATTTTAATGGGAATAATTTTGAGTACATTCCTTTTGGGGCAGGGAGGAGAATCTGTCCTGGCATTTTACTTGGTATAGCTAATATTGAGCTTCCACTTGCTTCATTACTCTATCACTTTGAATGGGAACTACCCAATGGAATCAAACCAGAGGACTTGGATATGACTGAAACCTTTGGAGCTGTTGCAGGAAGGAGAGACAACCTATTTTTGATTCCAACTCCCTATAATAACTTTTGA 1518 0.4236 MEFQPSFLVIASLLILVIWLSKICKQKVKGESVVHNKIPPGPRKLPLIGNLHQMARAGTLPHHTLQNLAHKYGPLMHLQLGEIPAVVISSPEMAKEVMKTHDLTFVDRPQLLCPQILAYGSTDIAFAPYGDYWRQMRKICTLELLSAKRVQSFSYIREDEVAKLIRSIHLSASAGSPVNVSKSVFSLVSTFVTRAAFGKKSEYEDELLTLLKKAVELAAGFDLDDLFPSMKPIHLITRMKAKLENMQKKLDKILEHILKEHQSNHDNSEAKETLVDVLLRVQQSGSLEIPVTLNNIKAVIWDVFVAGSDSSSTILEWAMSELTKNPLVMKKAQTEIREACRGKKIISEADLHELGYLKSVIKETMRLHPPAPLLLPRECREACKIGGYEIPMKTKVIVNAWALGRDPKHWYDAEKFIPERFHGSGVDFNGNNFEYIPFGAGRRICPGILLGIANIELPLASLLYHFEWELPNGIKPEDLDMTETFGAVAGRRDNLFLIPTPYNNF* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2042 505 Coils Coil 236 256 - -
Apr9g2042 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Apr9g2042 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 SUPERFAMILY Cytochrome P450 39 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 Gene3D Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PANTHER CYTOCHROME P450 71B11-RELATED 8 502 - -
Apr9g2042 505 Pfam Cytochrome P450 39 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 502 - -
Apr9g2042 505 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g2042 505 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2042 Apr-Chr9 28763001 28764662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2042 35 502 Cytochrome P450 AT3G26300 42.737 4.02e-140 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2042 - - gmx:100794503 820.846