Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2026 ATGGGTGAACAATTGAGGGTACTAAAAGTGATTGTTGTACAAGGGAAAAAACTAGTGATAAGGGATTTCAAGAGCAGTGATCCATATGTTGTGCTCAAGCTGGGGAATCAGACAGTAAAGACCAGGGTCATTAATTGCTGCTTGAATCCTGTTTGGAATGAAGAGCTTAGTTTTACTCTGACAGAACCTTTGGGAGTTCTGAGTTTGGAGGTATTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATGCTTTCCTGAACCTTCAACCACTATTATCTGCAGCTAGATTAAGAGATATTTTAAGGGTCTCCTCTGGTGAGACAACATTGAGGAAAGTCATACCTGATACTGAAAACTGTCTTGTCCGTGAAAGCAGTATCAATTGTGTTAATGGTGAAGTGGTACAAAATGTTTGGTTAAGGCTTCTTGGAGTTGAATCTGGGGAACTAGAATTGATCATCAAGTTGAGTTGA 480 0.3937 MGEQLRVLKVIVVQGKKLVIRDFKSSDPYVVLKLGNQTVKTRVINCCLNPVWNEELSFTLTEPLGVLSLEVFDKDLLKADDKMGNAFLNLQPLLSAARLRDILRVSSGETTLRKVIPDTENCLVRESSINCVNGEVVQNVWLRLLGVESGELELIIKLS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2026 159 CDD C2_ArfGAP 7 150 - -
Apr9g2026 159 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Apr9g2026 159 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 158 - -
Apr9g2026 159 SMART C2_3c 7 102 IPR000008 -
Apr9g2026 159 Pfam C2 domain 8 99 IPR000008 -
Apr9g2026 159 Gene3D C2 domain 1 116 IPR035892 -
Apr9g2026 159 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 158 IPR044562 -
Apr9g2026 159 PRINTS C2 domain signature 22 34 IPR000008 -
Apr9g2026 159 PRINTS C2 domain signature 46 59 IPR000008 -
Apr9g2026 159 PRINTS C2 domain signature 67 75 IPR000008 -
Apr9g2026 159 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 157 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2026 Apr-Chr9 28651171 28652413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2026 1 154 C2H2 Transcription Factor Family AT4G05330 44.805 6.46e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2026 - - aprc:113848065 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2026 9 28651171 28652413 Apr1g1875 1 28358754 28361267 PCT