Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2022 ATGGATGCTTTGTCTTGGACACTCAAGAACTTGGTTACACACTCTACTATAATTTATCTCATACACGTGTTCCCTGAGATCAAGCACATTCCAAATCCATTGGGAATAGGAATGATTCCAAGGAATCAAGTGAGTGCTGAGCAGGTGGAGAGTTATATTGCCCAAGAAAGAGGCAAGAGGAGAGAGCTCTTACAGAAATTCCTCCAATCATGTTCTACTTCCAAGGTAAAGGTAGACACCATCTTGATTGAGAGTGACTTGGTTTCAAAGGCTATCCTCGATCTGATCCCCGTTCTTCAAATAAGAAATTTAGTGATTGGCGCCAACAAATTCCATCTAAGAAAATCAAAATCAAGAAAAGGGAATGGCGTAGCCAATCAGATACTGCAGAATGCACCACAAAGTTGCAAGGTGAAAATTATATGTGAAGGGAAGGAAGTAAATGAGCAGATGATGTCACCCCCTCCACAGGCGGCTACCACTGCTAATGACACTTCCATAACCATAAAAGGTGGTCATCAACAAGATTCGATTTCATGTATTTGCTTCAAACCCAAGTTTAAATGA 567 0.4092 MDALSWTLKNLVTHSTIIYLIHVFPEIKHIPNPLGIGMIPRNQVSAEQVESYIAQERGKRRELLQKFLQSCSTSKVKVDTILIESDLVSKAILDLIPVLQIRNLVIGANKFHLRKSKSRKGNGVANQILQNAPQSCKVKIICEGKEVNEQMMSPPPQAATTANDTSITIKGGHQQDSISCICFKPKFK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2022 188 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 2 135 - -
Apr9g2022 188 Gene3D HUPs 1 153 IPR014729 -
Apr9g2022 188 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 1 187 - -
Apr9g2022 188 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 187 - -
Apr9g2022 188 CDD STK_N 3 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2022 Apr-Chr9 28628680 28629861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2022 3 145 Plant U-box Gene Family AT5G57035 28.966 3.15e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2022 - - gmx:100527773 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2022 9 28628680 28629861 Apr1g1880 1 28401401 28403242 PCT