Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2021 ATGACAACAAGGTCATTGGAAACTGAGCACGATGACGAGTGCATGCACTACGATTCCGATGACGAAAGGTCCACTATTTGCAATTGTAGTTTTATGGGGTTGAAGAGAAACCAGGTGATAGATTACAGCCCTAGCCGCAGCAACAGCAACAACAGCGAGATAGGAGACGGAGAAGATTCAGAGGAGCTGTTTGAAATCAATCTGATGAAGGATTCTCTGTCTTTGGATACAATACGAGAAGAGTGCGAGAGCACTGTGTTCTCTCTTGATCTTGATATCCACAACGCCAAATATGAAGATAACGTTGTTCATGTGGCAGTGGGAAGCGATGGAGAATCGAGCATGGAAGCACTTTCATGGGCCCTGAAACAGGCAGTGACACCCTCTACCACCGTTTGTCTCCTACACGTTTTCCCTAAAGTCAAGCTCATTCCAAGTCCCTTGGGAAGAATTCCGAGGAGTCATGTAAATGCAGAGTATATTAACATCCACTTAACGCAGGAGAGAGGGAAGAGGAAAATGCTCCTTCGAAAGTTCGTTGACCTATGCGTTGTTTCGAAGGTTAAGGTGGAGATGATGCTTGTTGAGGGTGACAACGTTGCTAAAGCCATCGTGGACCTTGTCGATAATCTTGATATAAGGAAATTGGTGATTGGAAAATCAAGAAAATATGGGTCTAGAAGGCAAAATTGCATAGGGGACAAGGTACTAAAAGATGCAAAGGAAAAGTGTGATATCAAAATCATAGGCGAAGGAAGAGAAGTGATGATTGGTTACAGAGACAATGGCAGTGTTTCACAGGAAAAGAAAATTGAAGCCCGTGGATTGGTCCCACTGAAGCGTTTAATACTGAGTTCGTTATGGTTATTTAGGTCCAGATTTTTTTAA 888 0.4324 MTTRSLETEHDDECMHYDSDDERSTICNCSFMGLKRNQVIDYSPSRSNSNNSEIGDGEDSEELFEINLMKDSLSLDTIREECESTVFSLDLDIHNAKYEDNVVHVAVGSDGESSMEALSWALKQAVTPSTTVCLLHVFPKVKLIPSPLGRIPRSHVNAEYINIHLTQERGKRKMLLRKFVDLCVVSKVKVEMMLVEGDNVAKAIVDLVDNLDIRKLVIGKSRKYGSRRQNCIGDKVLKDAKEKCDIKIIGEGREVMIGYRDNGSVSQEKKIEARGLVPLKRLILSSLWLFRSRFF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2021 295 Gene3D HUPs 92 251 IPR014729 -
Apr9g2021 295 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 19 291 - -
Apr9g2021 295 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 19 291 - -
Apr9g2021 295 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 105 225 - -
Apr9g2021 295 Pfam Universal stress protein family 105 228 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2021 Apr-Chr9 28624570 28626043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2021 100 252 U-box Gene Family AT2G45910 29.747 5.21e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2021 - - pvu:PHAVU_003G088000g 333.569