Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2006 ATGGAGGATCAAATATCTCCGGCAGAAGGTGTTGACGTAAGTGGTGTGAGCAAAGAGCAACAAGCTGCGGGCGTTGGGATTCTTCTTCAGATCATGATGTTGGTTCTGTCATTCGTGTTAGGTCACGTTCTTCGTCGCAAGAAGATTTACCTTCTCCCCGAAGCCAGCGCCTCTCTTCTCATTGGCTTACTCGTTGGCACACTCGCCAACATTTCTCACACTCAGACTAACATCAGGGCGTGGTTCAATTTTCACGAGGAGTTCTTCCTGCTCTTCCTTTTACCTCCTATCATATTTCAGTCTGGCTTCAGTCTCTCGCCTAAACCTTTCTTCTCTAATTTTGGAGCTATTGTCACGTTTGCTATATTCGGCACCTTTCTGGCTTCCATTGTCACCGGTGTCTTAGTTTATCTTGGAGGATTGGTGTACCTCATGTACAGACTGCCTTTTGTTGAGTGTCTAATGTTTGGTGCTCTTATATCCGCGACTGATCCTGTTACTGTTTTGTCAATTTTTCAGGAGCTCGGCACAGATGTCAATCTGTATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCTATTTCTTTGTACAGGACAATGTTAGTGATAAAAACGCATCCATCTGGACTAAATTTCTTCATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGGTCAATGTCTGCTGGTATTGGAGTTGGATTTATATCTGCTTTACTATTTAAGTATGCGGGGTTGGATGTTGACAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCATATTTCTCATACATGCTTGCAGAAGGTCTTGGATTGTCTGGTATTGTATCAATACTGTTCACGGGAATGGTCATGAAGCATTACACATATTCGAATTTGTCATGTAGTTCTCAAGGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAGACATTTGTATTCATCTACATGGGCATTGATATTGCTATGGAGAAACATCGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATCAATTGGAATCGCAAGGGCAGCTAATGTGTTCTCTTGTACATATGTGGTCAACTTGATCAGACCTGCCCATCGACAAATACCTCTAAAACACCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCTATGGCATTTGCCCTTGCTCTGCAATCAGTTCATGACCTTCCAGAAGGACACGGACAGACTATCTTCACTGCTACTACAGCAATAGTTGTTTTGACGGTATTACTGATTGGTGGTTCAACAGGCACCATGCTTGAAGCTTTAGAAGTTGTAGGTAGTGACATTCATATTAATGAGAGTCCTTTGACTTCTATATTTGATGAAAACAATGGTTATAGTTCTCCTAACGACGAAGATACGTCATCAAGGAACAAAATCAAGACGAAGCTTCAAGAATTCCATAGGAGTGCTGCATCTTTTACAGCATTAGATAGAAACTACCTCACACCATTCTTTACTAGTCAAAATGGAGATGAGGAAGATGAAGCTAAGCTTCTGACTTCTGGAAATGTGGGATTGGACATTCATGACCATGACCATTATTCGTCATGA 1602 0.4126 MEDQISPAEGVDVSGVSKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYLLPEASASLLIGLLVGTLANISHTQTNIRAWFNFHEEFFLLFLLPPIIFQSGFSLSPKPFFSNFGAIVTFAIFGTFLASIVTGVLVYLGGLVYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMLVIKTHPSGLNFFMVVVRFLETFVGSMSAGIGVGFISALLFKYAGLDVDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSCSSQGFVSAFFELISSLAETFVFIYMGIDIAMEKHRWSHVGFIFFSIISIGIARAANVFSCTYVVNLIRPAHRQIPLKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALEVVGSDIHINESPLTSIFDENNGYSSPNDEDTSSRNKIKTKLQEFHRSAASFTALDRNYLTPFFTSQNGDEEDEAKLLTSGNVGLDIHDHDHYSS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2006 533 Pfam Sodium/hydrogen exchanger family 33 436 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr9g2006 533 PANTHER SODIUM/HYDROGEN EXCHANGER 11 513 IPR018422 GO:0006812|GO:0015299|GO:0016021
Apr9g2006 533 PANTHER SODIUM/HYDROGEN EXCHANGER 6 11 513 - -
Apr9g2006 533 Gene3D - 150 201 - -
Apr9g2006 533 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr9g2006 533 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr9g2006 533 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr9g2006 533 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr9g2006 533 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 30 497 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2006 Apr-Chr9 28495099 28502389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2006 16 438 Antiporters AT3G05030 32.883 3.79e-51 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2006 K14724 - gmx:100810105 844.728