Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2003 ATGGCGAACCAAGAAGAAGATAGCAAGCTGAAGCTGTATTCGTATTGGAGGAGCTCTTGTTCCTTCCGAGTCCGAATCGCTCTCAACCTCAAAGGACTCAAATACGAGTACATAGCAGTCAATCTGTTGAAGGGAGAACAATCTCGTCCTGAGCTTCTCCAGCTTAATCCTGTTGGTTTTGTTCCCGTTCTAGTGGATGCCCATGTCGTTCTTTCTGACTCTTTCGCCATTATTATGTATTTGGAGGACAAGTATCCTCAGCATCCTTTGCTCCCTCGTGATATTCATAAAAGAGCAATCAATTTCCAGGCTGCTAGTATTGTTTCCTCAACAATACAACCACTTCAAAACCTGAGTTTACTGAACTACATTGGGGAAAAAGTTAGCCCTGATGAAAAACTTCCTTGGGCCCAAAGTGCAATTAGAAGAGGCTTTACAGCACTCGAAAAGCTATTGAAAGACCACAAAGGAAAATATGCAACTGGAGATGAAGTTTTCCTGGCAGATATATTTTTAGCCCCACAGTTACATGCAGCATTCAACAGATTCAACATTCAAATGAACGAGTTCCCTATTCTATCAAGATTGCATGAGACATATTATGAGATCCCAGCATTCCGGGAGGCTCTACCAGAGAACCAACCAGATGCAGTACATTAG 660 0.4242 MANQEEDSKLKLYSYWRSSCSFRVRIALNLKGLKYEYIAVNLLKGEQSRPELLQLNPVGFVPVLVDAHVVLSDSFAIIMYLEDKYPQHPLLPRDIHKRAINFQAASIVSSTIQPLQNLSLLNYIGEKVSPDEKLPWAQSAIRRGFTALEKLLKDHKGKYATGDEVFLADIFLAPQLHAAFNRFNIQMNEFPILSRLHETYYEIPAFREALPENQPDAVH* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2003 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Apr9g2003 219 Gene3D - 93 219 - -
Apr9g2003 219 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 7 219 - -
Apr9g2003 219 SUPERFAMILY Thioredoxin-like 7 93 IPR036249 -
Apr9g2003 219 CDD GST_N_Zeta 10 82 IPR034333 -
Apr9g2003 219 TIGRFAM maiA: maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824|GO:0005737|GO:0009072
Apr9g2003 219 Pfam Glutathione S-transferase, N-terminal domain 12 88 IPR004045 -
Apr9g2003 219 PANTHER MALEYLACETOACETATE ISOMERASE 7 219 - -
Apr9g2003 219 SFLD Glutathione Transferase (cytosolic) 10 198 IPR040079 -
Apr9g2003 219 Pfam Glutathione S-transferase, C-terminal domain 133 207 IPR004046 -
Apr9g2003 219 Gene3D Glutaredoxin 7 92 - -
Apr9g2003 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Apr9g2003 219 SFLD Main (cytGST) 10 198 - -
Apr9g2003 219 SUPERFAMILY GST C-terminal domain-like 89 217 IPR036282 -
Apr9g2003 219 CDD GST_C_Zeta 96 214 IPR034330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2003 Apr-Chr9 28482457 28485959 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2003 8 217 Glutathione S-transferase Gene Family AT2G02380 65.238 1.81e-102 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2003 K01800 - gmx:547590 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2003 9 28482457 28485959 Apr9g2003 9 28482457 28485959 ECH