Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2002 ATGGGTGAAAAAGCAATGCTATATCTGGTGCTTCTCAGTTATTTGTTGGTTGCGGAAACACAGACAACTAATGAGGATTTTACAGCTCTGATGTCTCTTACCAATAGCTGGCAGAATAAACCATTCAATTGGGAAGGTTTAGATCCTTGTAGTGGTTGGGATGGAATCAAATGCACCAAATCACGTGTTACATCCATAAAATTACCGGGCTTGGATATTAAGGGCGAGCTTTCCTCAGATATTGGGTCACTGTCTGAATTGGAGACGTTAGATCTCTCTCACAATAAGGGTTTAACTGGTTCACTTCCACATTCAATTGGAAATTTGAAGAAGCTGTCAAACTTATTTCTTGTTGATTGTGGTTTAAGTGGTCCTATTCCAGATGAAATAGGATCACTTAAGGAGCTGGTCTTCTTATCTTTAAATTCGAACTGCTTTAGTGGACGAATTCCGGCTTCTATTGGGAATCTATCAAAACTTAATTGGTTAGATATAGCTGACAATGAGCTTGAAGGACCAATTCCAATATCAAGCGGTGGTGCACCTGGCCTTGATATGCTTATCAGTACCAAACACTTTCATTTTGGGAAGAATAAGCTTTCAGGTACAATTCCACCACAACTTTTTAGCTCCGAAATGGCTCTTATACATGTGCTTTTTGAAAACAATGAATTTGAGGGCAACATTCCTTCAACTCTGGGACTGGTTCAGAGTCTGGAAGTGGTGCGCCTTGATAACAATATGTTAAGCGGACATGTGCCTCTCAACATCAACAATCTTACCAATGTTTATGAGCTGTACTTGCTCAACAATAAGTTGTCAGGCCCCCTTCCAAACCTTGAGGGAATGAACCAACTCATCTACCTGGATATGAGTAACAATAGCTTTGATGCATCGGATTTTCCAGCATGGATTTCTAGTCTTAATTCTCTGACAACACTAAGGATAGAAGATGCAGGAATTCAAGGGCAGATTCCTGATTCTTTATTTAGCCTTTCAAAGTTAAAGAACGTGATGCTACAAGACAATAGAATAAATGGAACTTTGGACATTGGGAACACCTACAGCAAGCAGTTACAACTTATTGATTTGCAGAATAATGAAATTGACGACTTCAAGCAACAAGATTTGGTAATCTCCGGGCTCAAAATAATACTTGCCCATAACCCAATTTGTGAGGAATCAGGAGTGACAAAGAGTTACTGCTCCATCCCAGGACTCAGTACACCATTTACCAAAACAAAGAATTGCCAACCTGCCACCTGCAGTTCAGATCAGGTTTTCAGTGCCCATTGCAAATGCTCATATCCGTATACAGGAGCTTTAAGGTTCAGAACACCTTCTTTCTGGGACTGGGAAAATGAAACTTCCCTCCAGGAAGATCTTATGCATACTTTTCAGACTTGTGGTCTACCAGTGGATTCAATTTCTCTGAGCACTCGTAGTAAACACCCATCTCAGTATCTTGAATTCACCTTACAAATCTTCCCATCAAGCCATGATCATTTCAATCAAACAGAGATTTTGAGCATAAGTTCGGTACTAAGCAACCTGACTTCAGAGGCGTTTTACTTTTTCCCTGATGAATATGGACATTATGAAGAACCCAATGAGGCAAGTAAATCATCAAAATCTGGCATCATAGTTGGAGCAGCAGCTGGTGGTGGTTCTGCCCTGCTTGTGTTACTACTCCTCTTAGGTGGTTATGCTTTCTGGCAAAAGAAAAGGGCGGAAAAAGCAATCCAACAAAATAATCCATTTGGACGTGGGGACCCAAGTGACAGCAATAGTATCATCCCTCAGTTAAAAGGAACAAGGAGATTCTCTTTTGAAGAGATGCAGAAATGCACCAACAAGTTTTCACACGCTAATGATATTGGATCTGGGGGATATGGAAAGGTTTATCGGGGAGTTCTACCCAATGGACAACTAATAGCCATAAAACGAGCTCAAAAAGAAACTATGCAAGGAGGGCTCCAGTTTAAAGCTGAGATTGAGCTCCTATCAAGGGTCCACCATAAGAATCTTGTTAGCCTTGTGGGGTTCTGCTTTGAGCGAGGGGAGCAAATTCTGGTGTATGAGTATGTTCCAAACGGAACTTTAAAGGATGCTATCTTAGGAGGTAAGTTGGACTGGACTAGACGACTTAAAGTAGCACTTGATATTGCAAGGGGCTTGGATTATCTTCATGAACGTGTCAATCCTCCTATCATCCATAGGGACATCAAATCAAGCAACATTTTGCTGGACGAGCGCTTGAATGCTAAAGTTGGTGATTTTGGGCTTTCCAAGCCTATGGTTGATTTTGAAAAGGATCATGTTACCACTCAAGTAAAAGGGACGATGGGATACATGGACCCAGAGTATTATACAAGTCAGCACTTGACAGAGAAGAGTGATGTTTATAGCTATGGAGTGCTAATGTTGGAGTTGATAACAGCAAGGAGACCAATAGAACGAGGAAATTATATTGTGAAGGTGGTTAGGAATGAAATTGATAAGACGAAATACTTATATGGGCTTGAGAAAATTCTGGACCCAAACATTGGTCCAGGGTCAACATTAAAAGGTTTTGAGATGTTTGTGGATCTTGCAATGGAGTGTCTTGAAGATTCACGTGATGACAGGCCTACAATGAATGATGTGTTAAAAGAAATCGAAACTGTGTTGCTGTCAATTGGGTTGAACTGCTCAGTTGAATCAACTTCATCTAACTATGACGAGGTAAGTGTCCAATTCTCACCATCCCAACAACATTGA 2760 0.4072 MGEKAMLYLVLLSYLLVAETQTTNEDFTALMSLTNSWQNKPFNWEGLDPCSGWDGIKCTKSRVTSIKLPGLDIKGELSSDIGSLSELETLDLSHNKGLTGSLPHSIGNLKKLSNLFLVDCGLSGPIPDEIGSLKELVFLSLNSNCFSGRIPASIGNLSKLNWLDIADNELEGPIPISSGGAPGLDMLISTKHFHFGKNKLSGTIPPQLFSSEMALIHVLFENNEFEGNIPSTLGLVQSLEVVRLDNNMLSGHVPLNINNLTNVYELYLLNNKLSGPLPNLEGMNQLIYLDMSNNSFDASDFPAWISSLNSLTTLRIEDAGIQGQIPDSLFSLSKLKNVMLQDNRINGTLDIGNTYSKQLQLIDLQNNEIDDFKQQDLVISGLKIILAHNPICEESGVTKSYCSIPGLSTPFTKTKNCQPATCSSDQVFSAHCKCSYPYTGALRFRTPSFWDWENETSLQEDLMHTFQTCGLPVDSISLSTRSKHPSQYLEFTLQIFPSSHDHFNQTEILSISSVLSNLTSEAFYFFPDEYGHYEEPNEASKSSKSGIIVGAAAGGGSALLVLLLLLGGYAFWQKKRAEKAIQQNNPFGRGDPSDSNSIIPQLKGTRRFSFEEMQKCTNKFSHANDIGSGGYGKVYRGVLPNGQLIAIKRAQKETMQGGLQFKAEIELLSRVHHKNLVSLVGFCFERGEQILVYEYVPNGTLKDAILGGKLDWTRRLKVALDIARGLDYLHERVNPPIIHRDIKSSNILLDERLNAKVGDFGLSKPMVDFEKDHVTTQVKGTMGYMDPEYYTSQHLTEKSDVYSYGVLMLELITARRPIERGNYIVKVVRNEIDKTKYLYGLEKILDPNIGPGSTLKGFEMFVDLAMECLEDSRDDRPTMNDVLKEIETVLLSIGLNCSVESTSSNYDEVSVQFSPSQQH* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2002 919 Gene3D Ribonuclease Inhibitor 22 177 IPR032675 -
Apr9g2002 919 SUPERFAMILY L domain-like 41 393 - -
Apr9g2002 919 Gene3D Phosphorylase Kinase; domain 1 592 695 - -
Apr9g2002 919 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
Apr9g2002 919 ProSiteProfiles Protein kinase domain profile. 620 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2002 919 Gene3D Transferase(Phosphotransferase) domain 1 696 899 - -
Apr9g2002 919 Gene3D Ribonuclease Inhibitor 281 426 IPR032675 -
Apr9g2002 919 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 10 909 - -
Apr9g2002 919 Gene3D Ribonuclease Inhibitor 178 280 IPR032675 -
Apr9g2002 919 CDD STKc_IRAK 626 887 - -
Apr9g2002 919 Pfam Protein kinase domain 622 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2002 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Apr9g2002 919 SMART serkin_6 620 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g2002 919 SUPERFAMILY Protein kinase-like (PK-like) 593 886 IPR011009 -
Apr9g2002 919 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2002 Apr-Chr9 28470846 28477769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2002 22 890 Receptor kinase-like Gene Family AT1G79620 50.329 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Apr9g2002 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g2002 - - gmx:100811702 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2002 9 28470846 28477769 Apr1g1915 1 28709983 28717903 PCT