Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1950 ATGGGGTGTGCCAGCTCGAAGCTGGACGATCTCCCAGCAGTGGCTCTATGCCGAGAGAGGTGCGGCTTCCTTGACGAAGCTATTCATCAGAGATATGCACTCGCAGCAGCCCACGTCGCCTACATCAATTCCCTCAGAGCAATTGGTGATTCTCTTCATCATTTCATTGAGCAAGAGAGGGAGAGGGATTTGGGTGCTCCCTCTTCTCCCTCTCCCTCTCCCTCCCCATCTCCGCCTCACAAACCACACCTCGCCAAACACGCCTCTCCCTCTCACTCCGATTCCGGCTCCCATCTCCACTTCCACTCCGATTCCGACGACCTCGGTTCCCTCCACCACTCCCCCCAATCCTCTCCTCTGCATCTCCACAATTACTATGACAATACTTCCGAGCCAGATCATCACCTTCACATCAATTTCATGAAGAACAAACCAGCCTCTTCAATCGTCTACGAGCAGAGACCAATGAACCCCGAAACTGTGTACGTCGGAGAGTCCTCTTCTTCCTCCTTTTACCCTCCGTATCGCTATCAGTATCCCTCTTACCCCTACGATCCCTACGCCGCCCCTCCTCCCTTCTACGGATCTTCCTCGCCTCCCCCTCCCCCCGCCGCCGCCGCCAAGCCTCCCCCCTCCCCTCCCAGGCCGCCTTCCACTTGGGATTTCCTCAACTTCTTCGATAGCACCGATGACAGGTACTATCCCCAACCCCATTACACCGCCACTCCCAGCCGCGACTCCAAGGAGCTCAGGGAGGAGGAGGGGATACCCGATTTGGAAGACGAGGATTACCAGCACGAAGTCGTCAAGCAAGTGCATGGGGATCAAAAGCTCGTCGACCCCAAACCCCAACCCCATCATCCCCTCCACAGAGAGAACAACCTCGACGAAGAAGACGAGGATGATGAAGAGGTGGAATACGAGGCTCATGTGGTTGATAAGGAAGTGGTTGCTGACGGGAACAAGGCCAAGGACCACGCCGCATTCGGAGCCCGCCGACCTGGTTCCCGGAATCCTCTCGAGGTTGCCAAAGAAATTCAGCTTCTCTTTCAGAGGGCTTCCGATTCCGGTGTCCTAATCGCCAGCATCCTTGAGGTCGGAAAGCTTCCCTATAATCGAAAGCGCGCGCCTTATCAAGCTTCTTCCAAGATGTTACACGTAGCTGCTCCCTCGTTGTCCGCGCTCACTTCTCAACCTTCTACTTCTAAAGATGCCGAATCTGCATCCACCGGTGATTTTGATCTTGATCTAACAACCAGGTCGCGCAATCTGTCCTCTACGCTGCACAAGTTACTTCTTTGGGAGAAGAAACTCTTCAATGAAGTTAAGGCAGAGGAAAAGATGCGTGTCATGCATGATAGGAAGTGTCGCAAGCTCAAGCGTTTGGATGACAGGGGTGCTGATTTTCATAAAGTTGATTCAACCCGAGCTTTGATTAAAAGTCTCTCCACAAAAATAAGAATGGCAATTCAAGTTGTTGATAAGATTTCTGTGACTATAAATAAGATAAGGGATGAAGAGCTGTGGCCGCAGCTGAAGGAATTAATCCAGGGGTTGGCCAGAATGTGGAAATCCATGCTTGAATGCCATCATAGTCAGTGTGAAGCAATTAGAGAAGCCAGGATTCTGGGTTCCATCGGGTCTAGGAAGAAGAGTGGTGATAGTCATCTTCAAGCAACCAAGCAGCTTGAACAAGAGCTCATCAATTGGACTTTCCAATTCTCTGGCTGGATAAGTGCCCAGAAAGGTTATGTTAGAGCATTGAATAATTGGCTACGGAAATGTCTCCCAGATGAACAGGAAGAAACACCTGATGGCATAGTCCCTTTTTCTCCTGGCAGGATGGGTGCTCCCCAAATATTTGTAATATGTCATCAATGGTCTCAAGATTTGGATAGAATATCTGAAAAGGACGTTGTTGATTCCATGCATGTATTTACCTTGAGTGTACTTCAGATATGGGAACAGGATAAGCTAGAAATGCATAGGCAGATGATGCAGAACAAGGATCTTGAGAGAAAAGTGAGAAATATAGATAGAGATGACCAAAAGCTGCAGAAGCAAATTCAGGCGTTAGAGCGGAAGGTGGTTCTGGTATCTGGAGACGGTAAAGGTCTCTCAGTTTCTGAGAATATCATATATCAGAGTGACAAAAGCAGTAGTCTGCAGGCTAGCTTGCAGCGCATTTTTGAGGCCATGGAAAGATTTACTGACGAATCTGTGAAAGTTTATGAGGATTTGCTACAACGGAGTGAAGAAGAGAGTGCTGAAAAGGAAAAAGAAAAGGAAAAAGAGGAACCCTACCGGAACCACAATCATCGCAGGCAATCTGAGGGAGAGAAAGAGAGCGTCGATTTCACCTTTTCAGAGTTCTCGTTGGGGGAGCTCAAAGCGGCCACCAACAATTTCAGCTCCGAGTATATCGTGTCGGAGAGTGGGGAGAAAGCCCCCAACCTCGTGTACAAAGGTAGGCTTCAGAACCAGAGCCGCTGGATTGCGGTCAAGAAGTTCAGCAAGGCTGCATGGCCCGATCCCAAGCAATTTGTCGAAGAGGCTTCCGGCGTCGGCAGGTTGCGCCATGCCAGACTTGCTAATTTGATCGGTTACTGCTGCGACGGCGATGAGAGGCTTCTCGTTGCTGAGTATATGCCTAATGACACTCTCGCCAAGCATCTCTTCCACTGGGAAAATCAGACTATTGAATGGGCCATGCGCTTGCGAGTCGCTCTTTACATTGCTCAGGCTTTGCATTATTGCAGTTCGGAGGGGCGGCCGTTGTACCATGACTTGAATGCTTATCGTGTTCTTTTCGATCAGCAAGGTGATCCGCGTCTTTCCTGTTTTGGTTTAATGAAGAACAGCAGGGATGGAAAAAGTTACAGCACTAATCTTGCTTACACGCCTCCTGAATATTTAAGAAACGGAAGGGTCACCCCTGAAAGTGTTGTCTACAGCTTTGGGACTGTTCTTCTAGACCTCCTCAGTGGCAAGCACATCCCTCCCAGTCATGCACTTGATATGATACAAGGAAAAAACATTATGCTATTAATGGATTCACATTTGGAGGGAAAGTTTTCTACGGAAGAGGCTACAATAGTTGTTAACCTTGCCTCTAAATGTTTGCAATCTGAACCACGGGAGCGGCCTGATACAAAGGATTTGGTCACAACACTTGCCCCATTGCATACAAAACCTGATGTTCGTTCACACGTCATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAACTCCACAACGTCCTCTTTCAGCAATGGGTGAGGCTTGTTCGAGAATGGACCTTACTGCAATACATCAGATCTTGGTTGCGACACACTATAGAGATGATGAAGGAACTAATGAGTTGTCGTTCCAGGAGTGGACCCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAGGACTTCAAAACAGCCATCGATAACTATTCCCAGTTTATTGATGTGGGAACGATGGTCTCCCCAACTGTTTTTGCAAGGCGCAGTCTATGCTATCTGTTATGTGATCAACCAGATCCTGCACTACGAGATGCAATGCAAGCACAGTGCGTTTATCCAGACTGGCCCACGGCTTTCTACATGCAGTCAGTTGCTCTTGCAAAGCTGGATATGCACAAGGATGCGGCTGATATGTTAAATGAGGCAGCTGCCTTGGAAGAGAAGAGGCAAAAAGGAGCGAGAGGATCATAG 3732 0.4885 MGCASSKLDDLPAVALCRERCGFLDEAIHQRYALAAAHVAYINSLRAIGDSLHHFIEQERERDLGAPSSPSPSPSPSPPHKPHLAKHASPSHSDSGSHLHFHSDSDDLGSLHHSPQSSPLHLHNYYDNTSEPDHHLHINFMKNKPASSIVYEQRPMNPETVYVGESSSSSFYPPYRYQYPSYPYDPYAAPPPFYGSSSPPPPPAAAAKPPPSPPRPPSTWDFLNFFDSTDDRYYPQPHYTATPSRDSKELREEEGIPDLEDEDYQHEVVKQVHGDQKLVDPKPQPHHPLHRENNLDEEDEDDEEVEYEAHVVDKEVVADGNKAKDHAAFGARRPGSRNPLEVAKEIQLLFQRASDSGVLIASILEVGKLPYNRKRAPYQASSKMLHVAAPSLSALTSQPSTSKDAESASTGDFDLDLTTRSRNLSSTLHKLLLWEKKLFNEVKAEEKMRVMHDRKCRKLKRLDDRGADFHKVDSTRALIKSLSTKIRMAIQVVDKISVTINKIRDEELWPQLKELIQGLARMWKSMLECHHSQCEAIREARILGSIGSRKKSGDSHLQATKQLEQELINWTFQFSGWISAQKGYVRALNNWLRKCLPDEQEETPDGIVPFSPGRMGAPQIFVICHQWSQDLDRISEKDVVDSMHVFTLSVLQIWEQDKLEMHRQMMQNKDLERKVRNIDRDDQKLQKQIQALERKVVLVSGDGKGLSVSENIIYQSDKSSSLQASLQRIFEAMERFTDESVKVYEDLLQRSEEESAEKEKEKEKEEPYRNHNHRRQSEGEKESVDFTFSEFSLGELKAATNNFSSEYIVSESGEKAPNLVYKGRLQNQSRWIAVKKFSKAAWPDPKQFVEEASGVGRLRHARLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAQALHYCSSEGRPLYHDLNAYRVLFDQQGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVVYSFGTVLLDLLSGKHIPPSHALDMIQGKNIMLLMDSHLEGKFSTEEATIVVNLASKCLQSEPRERPDTKDLVTTLAPLHTKPDVRSHVMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQKGARGS* 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1950 1243 Pfam Protein tyrosine and serine/threonine kinase 820 1058 IPR001245 GO:0004672|GO:0006468
Apr9g1950 1243 SUPERFAMILY Protein kinase-like (PK-like) 783 1062 IPR011009 -
Apr9g1950 1243 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 759 1241 IPR045845 GO:0004672|GO:0009742
Apr9g1950 1243 MobiDBLite consensus disorder prediction 69 83 - -
Apr9g1950 1243 Coils Coil 741 764 - -
Apr9g1950 1243 MobiDBLite consensus disorder prediction 193 218 - -
Apr9g1950 1243 Coils Coil 661 695 - -
Apr9g1950 1243 Gene3D Tetratricopeptide repeat domain 1132 1242 IPR011990 GO:0005515
Apr9g1950 1243 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Apr9g1950 1243 MobiDBLite consensus disorder prediction 262 294 - -
Apr9g1950 1243 MobiDBLite consensus disorder prediction 62 128 - -
Apr9g1950 1243 SUPERFAMILY TPR-like 1135 1237 IPR011990 GO:0005515
Apr9g1950 1243 MobiDBLite consensus disorder prediction 110 125 - -
Apr9g1950 1243 Pfam Protein of unknown function (DUF632) 341 650 IPR006867 -
Apr9g1950 1243 ProSiteProfiles Protein kinase domain profile. 806 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1950 1243 Gene3D Phosphorylase Kinase; domain 1 776 882 - -
Apr9g1950 1243 MobiDBLite consensus disorder prediction 752 781 - -
Apr9g1950 1243 Gene3D Transferase(Phosphotransferase) domain 1 884 1075 - -
Apr9g1950 1243 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 759 1241 - -
Apr9g1950 1243 MobiDBLite consensus disorder prediction 193 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1950 Apr-Chr9 27885164 27898789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1950 1 671 Acyl Lipid Metabolism Gene Families AT2G27090 28.121 1.94e-62 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Apr9g1950 DUF632 1.7e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1950 K14500 - aprc:113847989 2284.99