Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1937 ATGGCGACAATTGTTCCAGAAAGCGTTTCCTCTAAGTCTGAGCCGTTGTGTGTGAGTGACACAGACCCCCTGAATTGGGGTGGGGCAGCGGATTCACTCAAAGGTAGCCACTTTGAGGAAGTAAAACGGATGGTGGCTGAGTACCGGAAGGCAGTGATTTGTCTGGGTGGTGGGGAGACACTAACTGTATCGCAGGTTGCTGCTGTTGCTAGCCGAAATTCGGAGGTTAAGGTTGACCTCTCAGAGTCTGCAAGGGCAGGTGTTGAGGCCAGCTGCGAGTGGATCATGGAAAACATCAACAAAGGCACTGCCATTTATGGTGTTACCACTGGCTTTGGTGCTGCCTCCCACAGGCGAACCGAACAAGGCTTTGCTCTTCAGAAGGAGATGGTTAGGTTTTTAAACTGCGCAATATTTGGCTATGAGACAGAGTTGTCTCATGCACTTCCTAAATCAGGAGCCAGAGCAGCAATGCTTGTGAGGGTTAATACCCTTCTTCAAGGGTATTCGGGCATTAGATTTGAAATCTTAGAAGCTATCACCAAATTCCTCAACCACAATGTCACTCCCGTCTTGCCATTACGTGGTACAATTACTGCGTCCGGTGATTTAATTCCTCTGTCGTACATTGCTGCATTGCTAACAGGTAGGCGAAACTGTAAAGCTGTTGGACCCTCTGGAGAGTCTCTTAGCGCCAAGGAAGCTTTCCATTTAGTAGGTTTACATTCTGGGTTCTTTGAGTTGAAGCCCAAGGAAGGTATTGCCCTTGTAAATGGCACCACTGTTGGGTCTGGCGTGGCTTCTGTGGTGCTTTTTGAGGCAAACATATTAGCTTTATTGTCAGAAGTTCTGTCTGCAGTTTTTGCTGAAGTCATGCAGGGAAAACCAGAATTTACACATCATCTAATACATAAGCTGAAGTACCATCCCGGTCAAATTGAAGCTGCCGCTATTATGGAGCACATTTTAGATGGAAGCTCTTATGTCAATAAAGCTAAACAGCAACAGCCAGATCCATTGCAGAAGCCTAGGAAAGATCGTTATGCTCTTCAAACTTCTCCTCAGTGGCTTGGTCCACAGATTGAAGTTATCCGGTATTCGACCAAATCAATTGAAAGAGAGATAAACTCAGTGAATGACAATCCTTTGATTGATGTCACAAGGAATAAGGCTTTGAGTGGTGGTAATTTCCAAGGCACCCCTATTGGAGTTTCAATGGATAATGCACGTCTAGCTATTGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACTGAGCTCGTCAATGACATGTATAATAATGGGTTGCCATCAAATCTCTCTGCTGGTAGAAACCCAAGTTTGGACTACGGTTTTAAGGCAGCTGAAGTTGCCATGGCTGCTTATTGTTCGGAACTTCAATATCTAGCAAATCCAGTAACGAGCCATGTGCAAAGTGCTGAGCAACACAATCAAGATGTGAACTCTTTGGGCTTAATTTCTGCTTGGAAAACTGTGGAAGCCGTTGAGCTATTAAAGCTCATGTCTTCCACTTATCTGGTTGCACTCTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTTAGGAACAGAGTCAAGAATACTGTAAGCAGTGTTGCGAAGAAGACATTAGTCAGTGAAGACAAAGAAGAAACTAACCCATTTCGATTTTGTGAGATAGATTTGCTTAAAGTCGTTGATAGAGAATATGTATTCTCCTACATTGATGATCCCTCCAATGTTACGTACCCACTGATGCCGAAACTAAAGCAAGTACTTTACGAGCAAGCACACATCAGTGCCATTAATGACAAGAATGTAAACTTGTTAATATTTGAGAAGATTGGAGATTTTGAGAATGAATTGAAGTCTCTCTTGCCGAAGGAAATTGAAAGTGAAAGGCTGGCTTATGAGAATGGCAATCCAGCAATTCCGAACAGAATTAAGGAGTGTAGGTCATACCCACTATACAAGTTTGTGAGGGAGGAGTTAGGCATAGGGTTGCTCACCGGAGAAAAGACTGCCTCCCCAGATGAGGAATTTGAAAAAGTATTTACAGCCATGAGTCAAGCAAAGATTATTGACCCAATTCTGGAATGTCTTGGAGATTGGAACGGGGTCCCCATCCCAATATAA 2139 0.4376 MATIVPESVSSKSEPLCVSDTDPLNWGGAADSLKGSHFEEVKRMVAEYRKAVICLGGGETLTVSQVAAVASRNSEVKVDLSESARAGVEASCEWIMENINKGTAIYGVTTGFGAASHRRTEQGFALQKEMVRFLNCAIFGYETELSHALPKSGARAAMLVRVNTLLQGYSGIRFEILEAITKFLNHNVTPVLPLRGTITASGDLIPLSYIAALLTGRRNCKAVGPSGESLSAKEAFHLVGLHSGFFELKPKEGIALVNGTTVGSGVASVVLFEANILALLSEVLSAVFAEVMQGKPEFTHHLIHKLKYHPGQIEAAAIMEHILDGSSYVNKAKQQQPDPLQKPRKDRYALQTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVTRNKALSGGNFQGTPIGVSMDNARLAIASIGKLIFAQFTELVNDMYNNGLPSNLSAGRNPSLDYGFKAAEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISAWKTVEAVELLKLMSSTYLVALCQAIDLRHLEEIFRNRVKNTVSSVAKKTLVSEDKEETNPFRFCEIDLLKVVDREYVFSYIDDPSNVTYPLMPKLKQVLYEQAHISAINDKNVNLLIFEKIGDFENELKSLLPKEIESERLAYENGNPAIPNRIKECRSYPLYKFVREELGIGLLTGEKTASPDEEFEKVFTAMSQAKIIDPILECLGDWNGVPIPI* 713
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1937 712 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 196 212 IPR022313 GO:0016841
Apr9g1937 712 PANTHER HISTIDINE AMMONIA-LYASE 1 712 IPR001106 -
Apr9g1937 712 CDD PAL-HAL 59 523 IPR001106 -
Apr9g1937 712 Gene3D Fumarase/aspartase (Central domain) 262 707 - -
Apr9g1937 712 Gene3D - 526 647 IPR023144 -
Apr9g1937 712 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 22 702 IPR005922 GO:0005737|GO:0006559|GO:0016841
Apr9g1937 712 SUPERFAMILY L-aspartase-like 22 712 IPR008948 GO:0003824
Apr9g1937 712 PANTHER PHENYLALANINE AMMONIA-LYASE 1 712 - -
Apr9g1937 712 Pfam Aromatic amino acid lyase 61 525 IPR001106 -
Apr9g1937 712 Gene3D - 15 260 IPR024083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr9g1937 Apr-Chr9 27823064 27825447 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1937 12 712 Monolignol Biosynthesis Gene Families AT2G37040 72.365 0.0 1076
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1937 K10775 - gmx:100787872 1220.68