Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1923 ATGGAGGAGACCCAGAGGCAAGAGGTAGTATCTGATGAAGAAGCCTTCCTTTTTGCCATGGAACTAGCAGGTGCCTCTGCACTCCCCATGGTCCTCAAGTCAGCTCTGGATCTTGGTATCATAGAAACTATAGCCAAGGCTGGTCCTAGTGCATACCTTTCCCCTTCTCACATAGCTGCAAAGGTCCAAACAATAAAGAACCCGGATGCACCTGCTATGCTGGACCGCTTGTTGCGCCTCTTGGCTAGCTACAACATCCTCACATGCTCCCTCATTCAACTTCCTCATGGCAAGGCTGAAAGACACTATGCTCTTCACCCAAAGGCCAAATACCTTGTAAACAATCAAGACGGTGTTTCCGTGGCTGCTTATTTTCTCATGGAACAGGACGTTGTCCTCAAAGACATGTGGTACCACTTGACAGATTCAATCAAAGAGGGTGGCCTTCCGTTTAACAATGCTTATGGGATGACTGCCTTTGAATTCCACGGCACAAATCCAAGATTCAACAAGCTTTTCAACAAGGGATTATCTGATTGCTCAAGCATCACAATGAAGAAAATTCTTGAGACCTACAATGGCTTTGAAGGAGTTGGATCTGTGGTTGATGTTGGCGGTGGGAGTGGAGCTATTATTAACATGATTGCCTCTAAGTATCCCACCATCAAGTGCGTTAATTTTGACTTGCCCCATGTGATTAAAGAAGCTCCATCTTATCCAGGCGTGAAGCATGTTAGCGGAGACATGTTTGTGAGTGTTCCAAAAGGCGACGTGATTTTCATGAAGTGGGTATGTCATGACTGGAATGATGAGCAATGTTTGAAATTGTTGAAGAACTGTTATGATTCCCTTCCTAACACTGGGAAGGTGATTTTGGCTGAAGGCATTCTTCCAGAAATCCCAGACTCAAAGTTGACTTCAAGGTGTGAGTTTCAAATGGATATCATAATGTTGTGTCATAGCTATGGTGGCAGAGAAAGAACACAGAAAGAGTACGAGGCCTTGGCTAATGAGGCTGGATTCCAAGGTTTCTGCGTAGCGTGTCGTGCTCTCAACATCTATCTCATGGAATTTCTTAAGAACCCTTGA 1089 0.449 MEETQRQEVVSDEEAFLFAMELAGASALPMVLKSALDLGIIETIAKAGPSAYLSPSHIAAKVQTIKNPDAPAMLDRLLRLLASYNILTCSLIQLPHGKAERHYALHPKAKYLVNNQDGVSVAAYFLMEQDVVLKDMWYHLTDSIKEGGLPFNNAYGMTAFEFHGTNPRFNKLFNKGLSDCSSITMKKILETYNGFEGVGSVVDVGGGSGAIINMIASKYPTIKCVNFDLPHVIKEAPSYPGVKHVSGDMFVSVPKGDVIFMKWVCHDWNDEQCLKLLKNCYDSLPNTGKVILAEGILPEIPDSKLTSRCEFQMDIIMLCHSYGGRERTQKEYEALANEAGFQGFCVACRALNIYLMEFLKNP* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1923 362 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Apr9g1923 362 Gene3D Vaccinia Virus protein VP39 113 360 IPR029063 -
Apr9g1923 362 PANTHER BNAA10G07270D PROTEIN 2 360 - -
Apr9g1923 362 Pfam O-methyltransferase domain 137 342 IPR001077 GO:0008171
Apr9g1923 362 SUPERFAMILY "Winged helix" DNA-binding domain 12 117 IPR036390 -
Apr9g1923 362 Gene3D - 1 112 IPR036388 -
Apr9g1923 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 360 IPR016461 GO:0008168
Apr9g1923 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 357 IPR029063 -
Apr9g1923 362 Pfam Dimerisation domain 30 82 IPR012967 GO:0046983
Apr9g1923 362 PANTHER O-METHYLTRANSFERASE 2 360 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1923 Apr-Chr9 27749951 27752812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1923 3 360 Monolignol Biosynthesis Gene Families AT5G54160 62.674 2.40e-166 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1923 K13066 - gmx:100780100 497.664