Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1922 ATGGCTATGGAAGAAGCGCAGAAGCACGTAAGTGGAGAGGATGAGGAAGCCTTTCTATTTGCTCTAACATTTGTGGGTGCATCTGCGGTTCCAATGGTGCTTAAATCAGTTTTGGAGCTTGGTATCATAGAAACCATTGCTAAGGCTGGTCCTGGAGTTTACCTTTCCCCTTCTCAAATAGCTTCTCAGCACCCAACAATAAAGAACCCTGATGCCCCTGCTATGTTGGATCGTTTGTTGCGCCTCTTGGCTAGCCACAACATCCTCACTTACTCCCTCTCTCCATTGCCTAATGGTAAGTCTGAAAGGCACTATGCTCTTCACCCCAAAGCCAAATACTTTGTCAACAATCAAGATGGCCTCTCCATGATTGCCACCTTTCTCATGCAACATGACAAAGTCCTCAAAGAGATGTGGTACCACTTAAATGATTCAATTCAGGAGGGTGGCCTCCCATTTAACAATGCTTATGGAATGAATGCCTTTGAATTCCATGGCACAAATCCAAGGTTCAACAATCTTTTCAACAAGGGAATGTCTGATTACTCTAGCCTCGTAATGAAGGAAATTCTTGAGACCTATAATGGTTTTAAGGGTTTCAAATCTGTGGTTGATGTTGGCGGTGGGACTGGGGCTGTTATTAGCATGATCGTCTCCAAGTATCCCACTATAAAGGGTGTTAATTTTGACTTGCCCCACGTGATTAAAGGAGCTCCATCTTACCCAGGTGTGGAGCATGTTGGTGGAGACATGTTTGTCAGTGTTCCAAAAGCTGATGCCATTTTGATGAAGTGGGTATGTCATGACTGGAATGATGAAGAATGCTTGAAATTTTTGAAGAACAGCTATGATTCCCTTCCTGGCGAGGGGAAGGTGATTTTGGTGGAATGCGTTCTTCCGGAAACCCCAAATTCAAACTTGGCTACGAAGTGTGTGTTTCTAATGGATGTTATCGTGTCGTGTCATAGCTCAGGTGGAAAAGAGAGAACAGAAAAAGAGTATGAGGCCTTGGCTAAGGGGGCTGGGTTCCAAGGTTTCCGAGTAGCATGCTGTGCTTTCAACACCTATGTCATGGAATTTCTTAAGAACCCTTAA 1095 0.4429 MAMEEAQKHVSGEDEEAFLFALTFVGASAVPMVLKSVLELGIIETIAKAGPGVYLSPSQIASQHPTIKNPDAPAMLDRLLRLLASHNILTYSLSPLPNGKSERHYALHPKAKYFVNNQDGLSMIATFLMQHDKVLKEMWYHLNDSIQEGGLPFNNAYGMNAFEFHGTNPRFNNLFNKGMSDYSSLVMKEILETYNGFKGFKSVVDVGGGTGAVISMIVSKYPTIKGVNFDLPHVIKGAPSYPGVEHVGGDMFVSVPKADAILMKWVCHDWNDEECLKFLKNSYDSLPGEGKVILVECVLPETPNSNLATKCVFLMDVIVSCHSSGGKERTEKEYEALAKGAGFQGFRVACCAFNTYVMEFLKNP* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1922 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 360 IPR029063 -
Apr9g1922 364 SUPERFAMILY "Winged helix" DNA-binding domain 12 117 IPR036390 -
Apr9g1922 364 PANTHER O-METHYLTRANSFERASE 9 362 IPR016461 GO:0008168
Apr9g1922 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 362 IPR016461 GO:0008168
Apr9g1922 364 PANTHER BNAA10G07250D PROTEIN 9 362 - -
Apr9g1922 364 Pfam Dimerisation domain 32 84 IPR012967 GO:0046983
Apr9g1922 364 Gene3D - 2 114 IPR036388 -
Apr9g1922 364 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Apr9g1922 364 Gene3D Vaccinia Virus protein VP39 115 362 IPR029063 -
Apr9g1922 364 Pfam O-methyltransferase domain 139 344 IPR001077 GO:0008171
Apr9g1922 364 CDD AdoMet_MTases 203 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1922 Apr-Chr9 27743225 27746562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1922 10 362 Monolignol Biosynthesis Gene Families AT5G54160 61.190 2.76e-162 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1922 K13066 - gmx:100780100 520.39