Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1902 ATGCCTGCTGAGAACTCTAAGTCGAAGTCGAACAATGGTGAATGTGATGGAGAAGTTGAAGCGTTTGTTGAGGTTGATCCAACGGGGAGGTTTGGGCGTTACAACGATCTGCTAGGGTGTGGAGCAGTGAAGAAGGTTTACAGAGGATTCGATCAAGAGGAAGGCATTGAGGTGGCTTGGAATCAGGTTCGGTTGAGGAATTTCAGTGAAGATCCGGTTCTCATTAATCGCCTTCATTCTGAGGTCGAGTTGCTTAGAACCCTATCAAACAAATACATCATTGTTTGTTACAGTGTCTGGAAAGATGACCATCACCACACTATCAATTTCATCACTGAGATCTGCACTTCTGGTAACCTCAGAGATTACCGCAAGAAGCATCCCCATGTCTCCATCAAGGCTTTCAAGAAATGGTCCAAACAACTCCTTCAGGGTTTGGAGTATCTTCACACTCACGACCCCTGCATTATTCACAGGGATCTCAATTGCAGTAACATCTTTGTTAACGGCAACATTGGCCAGGTGAAAATTGGTGATCTTGGATTGGCAGCAATAGTGGGAAGGAACCATGCGGCGCATTCAATTTTAGGGACGCCGGAGTATATGGCTCCGGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATATACTCTTTCGGAATGTGTTTGCTTGAAATGGTTACAATGGAAATACCCTACAGTGAATGTGACAGTGTCGCCAAGATATACAAAAAGGTGACAATGGGAATTAGGCCTCAGGCCTTGAGCAAAGTCTCAGATACAGAGGTGAAGGCATTCATTGAGAAGTGCATAGCACAACCAAGGGCTAGACCTTCAGCCACGGATCTCCTCAAGGATCCTTTCTTTTATGAACTCACCAATGATGAAGAATCAACACCCATCAATTGA 912 0.4496 MPAENSKSKSNNGECDGEVEAFVEVDPTGRFGRYNDLLGCGAVKKVYRGFDQEEGIEVAWNQVRLRNFSEDPVLINRLHSEVELLRTLSNKYIIVCYSVWKDDHHHTINFITEICTSGNLRDYRKKHPHVSIKAFKKWSKQLLQGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRNHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTMGIRPQALSKVSDTEVKAFIEKCIAQPRARPSATDLLKDPFFYELTNDEESTPIN* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1902 303 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 11 294 - -
Apr9g1902 303 Gene3D Transferase(Phosphotransferase) domain 1 115 296 - -
Apr9g1902 303 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1902 303 SUPERFAMILY Protein kinase-like (PK-like) 25 290 IPR011009 -
Apr9g1902 303 Gene3D Phosphorylase Kinase; domain 1 16 113 - -
Apr9g1902 303 ProSiteProfiles Protein kinase domain profile. 32 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1902 303 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1902 Apr-Chr9 27629320 27631742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1902 6 290 MAP Kinase Kinase Kinase AT5G55560 75.789 1.36e-169 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr9g1902 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1902 K08867 - gmx:100807414 565.844