Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1901 ATGCTGATGTCACTGGAGTTGACATGTTCAACTTGTGAATCTCGTTTTGTTGTTCAGACCTCAAGCGAGGTTGATTTGGTAAATGATGGGTATCGCTGGCGCAAATATGGGCAGAAACTAGTTAAGGGGAACACCAACCCACGTTACTATCGATGCTCAAATCCTGGATGCCCTGTCAAAAAGCACGTTGAAAGGGCCTCTCATGATTCAAAAATTGTGATAACTACCTATGAGGGACAACACGACCATGAAATCCCTTCTGGAAGGACTGTCACTAACAATGCAGCTACAAGTTCTCACACAGTAGCCGTTAATGGCAAGGCAGGAACAAAATCTGGAGGTAATTCCGTTTGTATTGATAAAGGGGAACACAGTTGCTTGGACTCGGCAAACAGATTACCTGACCAACTAAATGGAGAGTCAATTACCAAATCAAAGACTGGTGATATGGTTGAGTTTGGGATGATCTCTAATGAGGGTCCTGACAGTAAATTAAGTGAGCAAGAACAACAAAATGATAACTCAGAAATCAAAGATAATTCTGTCGGCAACGACATCATATGCCATTCAGGTTCTGGAGTTCCATGTAAATCAAACGAACAGCTGAAAGATGAGGTAAAAACTACATCAGAAGGAAGTAAGGATTGCCTTAATGTGGTTGCCATTCATGATACTCCTAATACAGGAAGTGAATTTAATAAGCAAACCTCATCTGATGCCGAACCTGTCCAAAGCTAA 738 0.416 MLMSLELTCSTCESRFVVQTSSEVDLVNDGYRWRKYGQKLVKGNTNPRYYRCSNPGCPVKKHVERASHDSKIVITTYEGQHDHEIPSGRTVTNNAATSSHTVAVNGKAGTKSGGNSVCIDKGEHSCLDSANRLPDQLNGESITKSKTGDMVEFGMISNEGPDSKLSEQEQQNDNSEIKDNSVGNDIICHSGSGVPCKSNEQLKDEVKTTSEGSKDCLNVVAIHDTPNTGSEFNKQTSSDAEPVQS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1901 245 MobiDBLite consensus disorder prediction 131 145 - -
Apr9g1901 245 Pfam WRKY DNA -binding domain 28 84 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1901 245 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 196 IPR044810 GO:0003700
Apr9g1901 245 PANTHER WRKY TRANSCRIPTION FACTOR 1 7 196 - -
Apr9g1901 245 MobiDBLite consensus disorder prediction 223 245 - -
Apr9g1901 245 MobiDBLite consensus disorder prediction 129 184 - -
Apr9g1901 245 SMART WRKY_cls 27 85 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1901 245 Gene3D WRKY domain 14 79 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g1901 245 MobiDBLite consensus disorder prediction 221 245 - -
Apr9g1901 245 SUPERFAMILY WRKY DNA-binding domain 19 86 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g1901 245 ProSiteProfiles WRKY domain profile. 22 86 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1901 Apr-Chr9 27618303 27620107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1901 10 94 WRKY Transcription Factor Family AT2G04880 70.930 1.97e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g1901 WRKY 1.6e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1901 K18834 - gmx:100782726 366.696