Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1900 ATGCAGGCATCAGAGCAACATAGAAGTTCAAGCATGTACCATCAACCATTACAACAATTTGAAGCCTACTGCATGCCGCAGTATCGAACTCTAAATCATCAGCTATACTACCACAACGGAGGCCATGGAACCCACTTCTCCAATCCAAGTTCTTCTGAATTTTACTGTACATTAGAATCATCCTCTGCAGCTGGCAGTTTCACTGTATACAATTCTCCTTCAACTGTTAGTTTCTCACCTAACGGTAGCCCCATATCGCAGCATGATTCTCAGTCATATCCACCTGACCAGCATAATTCCCCTGAGAATACCTATGGCTCTCCAATGAGTGGATCTTGCATAACTGATGATTTAAGCAGCTTCAAGCACAAGCTAAGAGAGTTGGAAAGTGTAATGTTTGGCCCTGACTCTGATAATCTTGATAGTTATGATAGTGCCATCAGCAACGAAACCAACTTTGTTTCACTTGAGATGGACAGTTTGAGACAAACAATGCTGGCAATTTCTAGTAAAAGCCTAAAACAGATCCTTATTTCATGTGCCAAAGCAATTGCAGACAATGATTTGCTGATTGCACAATGGCTGATGGATGAATTACGGCAGATGGTGTCTGTTTCTGGTGAACCAATCCAACGCTTGGGAGCATACATGTTGGAAGGTCTCGTTGCCCGATTGGCTGCCTCTGGGAGTTCAATATACAAATCTTTACGATGCAAAGAACCAGAAAGTGCTGAGCTTCTCTCCTACATGCACATACTATATGAGGTTTGCCCCTACTTCAAATTTGGGTACATGTCTGCAAATGGAGCCATTGCAGAAGCTATGAAAGATGAAGACACAGTTCACATAATTGATTTCCAAATTGCTCAAGGAAGTCAATGGATCACGTTAATTCAGGCTTTTGCGGCTAGACCTGGAGGACCACCCCACATCCGGATCACGGGTATTGATGATTCAACATCAGCCTATGCCCGTGGCGGTGGACTACACATAGTGGGAAAGAGGTTATCAAAGCTTGCTGAGCATTTTAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCTGGTTGTGATGTTCAACTACATAACCTTGGTGTTCGACCAGGCCAAGCTCTGGCTGTCAATTTTGCATTCATGCTACACCATATGCCAGATGAAAGTGTGAGTACTCAGAATCACAGGGATAGGCTGTTGAGGTTGGTTAAGAGCCTATCACCAAAGGTGGTTACACTTGTTGAGCAAGAATCTAACACCAACACTGCTGCATTCATTCCACGTTTCCTTGAAACTCTGGACTACTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTCCCAGAGATCATAAAGAGAGAATCAATGTGGAACAGCATTGTTTGGCAAGAGACTTGGTTAACATCATAGCTTGTGAAGGGATGGAGAGGGTGGAAAGACATGAGCTGCTTGGGAAATGGAGGTCAAGATTTGCAATGGCTGGTTTCACTCCTTACCCCTTGAGTTCATTGGTGAATGGCACCATTAAGAAATTGCTTGAGAACTACAGTGATAGATATAGACTTGAAGAGAGAGATGGAGCTCTGTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCATGGAAATGA 1632 0.4332 MQASEQHRSSSMYHQPLQQFEAYCMPQYRTLNHQLYYHNGGHGTHFSNPSSSEFYCTLESSSAAGSFTVYNSPSTVSFSPNGSPISQHDSQSYPPDQHNSPENTYGSPMSGSCITDDLSSFKHKLRELESVMFGPDSDNLDSYDSAISNETNFVSLEMDSLRQTMLAISSKSLKQILISCAKAIADNDLLIAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLAASGSSIYKSLRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDTVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGKRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGQALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFIPRFLETLDYYTAMFESIDVTLPRDHKERINVEQHCLARDLVNIIACEGMERVERHELLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLEERDGALYLGWMNRDLVASCAWK* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1900 543 MobiDBLite consensus disorder prediction 78 109 - -
Apr9g1900 543 Pfam GRAS domain family 173 543 IPR005202 -
Apr9g1900 543 ProSiteProfiles GRAS family profile. 164 543 IPR005202 -
Apr9g1900 543 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 543 - -
Apr9g1900 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 543 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1900 Apr-Chr9 27613969 27617645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1900 111 543 GRAS Transcription Factor Family AT5G48150 76.993 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr9g1900 GRAS 3.8e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1900 - - gmx:100808300 1011.91