Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1891 ATGTCTCAAACCCAAGCAAGCACTTGTTCAGGGGGCGCCAACATTGAAGTTGGTGCCACCACCATACTCCTCAGCAGCAAGTACAGGAAGAAATGGCGCGTATTATACACAGCCACAGGAATCGTCATCTCTCTGACGAAGCGTGGTAACTATGAGTCTCCACCATCACCACTTTCTTCGGTACCATACACCTCATTGCCTGCATCTGAGCCTCCTGCTAGAACCTCCTCTGTCAAATCTTGTGTTGCAATTGATGTAGCCCCTGATACCGAAGAGGTGAAAGAAGAAGAAGATGCCGAAGGGCACATTAGGAAAAACATTGAGCGAATTGTGAAGGAGGAGGACTTGAAATCGCTTCATAATCTTGGTGGGGTCGACCTCATTTCCTCGGTTCTTCTTCGTCAACGTCAACACTCTGAGGGTGATGGGAACCGAAATATGTTGGAGTCCACAATACCGATTCTTGGAACAAGCTTTTGTAGCTTTTTGTTGATGAACTGCAAATGCAATGGTTACACAATTTTGATGTTGTTGATCGCGGCGGGGTTGTCCTTCGCCATAGAGTTGAAGCAGGAGGGACCTAAATATGGTTGGCATGATGGTTTTGCTATAGTTTTTTCTGTTTTCCTGCTGGTTGGAGGAAATTCAGTAGCAAACTTTTGGCGTGAGAGAAAAATGTTGAAACTGGCAAAGAGAAGGAACAAGTTGGAGTTCACTGTTGAAAGAGGTGAAGAGTCCCTAGAGGGGGTTCCATTATCTGATATTATGGTGCTTGACAAGGTGTGCCTGAGGCAAGGTGATGAGGTTCCTGCAGATGGTTTGCTTGTAAGTGATGACATTCTTGAGCTAGCTGAGGCAACAAAAAGTAAAAGGGGAAACCCATTTCTTGTATCCGGTTCAAAGGTGATTAGGGGCCAAGGATGGATGCTTGTAACATCAGTTGGAAGTTCTCTGAGTTATAATCCAAAAAGGGGAGGCTTGTTGGAGACTCTAATTGAAAAGCCTATTTCTTACATTGACAAGTCTGCTCTTTTGATCTCTGTAGTGATTACCCTTGTGGTGTTCATTCGCCTAATCTGTCTAAAGGATGGGGGGAATAGTGGCTTGCCAGAAATGAAGGGGAAGGTCTCAGTTGGCTTGTTGATGGAAATCCTTGAGAGAGTTTTTTTGAGACCACACGGAAGGGTTTCCATTTTAACAGGTCTTGTTACTTTCGCAATACTATTTGTGCAACATGGAATGCCACTTATGGTTACAATTTCTCTCAAGTGCCAGATTGATAGGGTAGTGTCAAACCAAGAAGCAGTTCTTAATGATTTATCATCTTTTCCAACAATGGGGTTGGTAACTGTGATCTGTATTGATGCGTCAGGTGGGCTCATGTCTAATCCAAAGGAAGTTAGCAGAATATGGATGGGGGAGAAAGATATCATGAGCAAGGTTGAGGAAGCAGAAACAGATCAAGTTGTGCTTGACATGCTTAAACAAGGAGTTGGTTTATCAGTTCTTAATCCAGAGCTTTCTCTTACCCCTATGTGCCATCCACTTGTTTCTTGGGCCAAAACAAATTGGGAAATGGACATGAAATCTTTCACAGAAAAATTTGTCATTGTTAAGCACAGCAAACTGGATTCTGACAAAGAATGCAGTAGAGTTTTGGCCAGAGAAATTAGGTGCAATGAACAAGTACTACACTTGCACTGGAGTGGGACAGCATCCACCATATTAGAGAAGTGTTCATCATACTATGATAGTGAAGGGGCATGCCATGCCATGGAAAACCAGAAAATCAAATTTGGGCAAGTGATTAAAGAGATGGAGGATGATGGCCTTAAGTCAATTGCTTTTGCTTATAGAAAAACAGATGCTGAAGAACTTGAGCAAGATGAGTTGATCTTGTTAGGAGTGATAGGTATCAAAAGCACTTGTCAAAAATCTATAAAACCAGCTTTGGAAAATCTCAGAAAAACAGTACAGATCAAACTGATCTCGAGAGATGATGACATCTTGGCAGTGAAAGGCATAGCTTGTGAACTTGGAATAGAAGTGCCACCAGATGGTATTGAGCTTGAAGGAGAAGAACTTCAAGATTTGAATGAGGAAGCTAGATTACACAAAATGGATGGAGTCCTCGTAATGGGAAGCTTCCATCTTAAAGACCTACTTCTCATGATACAGGAATGGCAGAAGAATGGTGAGGTGGTTGCATTCATTGGAACAAGGATGATGACTAATCATACTTCTATTCTGGAGGAAGCTGATGTAGGGATAGTTCATGATTCTCTAGGAAGAATAGTGGATAGAGATTGTTTCGGTATATCTATGCAATGTTTTTGTGCATTGGAACCAATTGTGAAGGCTGGTAGGAGTATATACCACAATATTCAGAAGTTCATTCAACTTCAACTGACATGTACCATATCAGGGTTAGTCATATCCTTGATTACAACAATATCTACTGGAGATTCCCCTCTAACAGCATTCCAGTTGATTTGGGTTAATGTTGTAATGAACATTCTGGGTGGCCAAATGATGGTAATGGAGTTAACTAGCGAGGAACAACTTGCCAAAAAACCATCTCAGTGTAGAAATCAGTCAATTATAACCAAAGAAATCTGGAAAAACATTGTTATTCAGGTTTTATATCAGGTTTCTGTGTCTATAATACTTGAGTTCGGGGGACATGTTATGGACAGGGAAAAACACGTTAGAAAAACCATGATCTTCAACACATTCCTATTATGTCAGCTCGCTAATCAACTCAACACGATGCAGTTGTTGAAACTGAAACACACTCAGATTGTTCTTCAGAACTACTATTTTTTAGTAGCTTTTGGTGGTTGTTTGCTCATGCAGGTGCTGATGATTGAGTATGCAAAAGGCTTATCCGATTGCATGCGGCTGAATGCTACTGGATGGGCTATTTGTGTGCTAGTTGGTGCTTTTTCATGGGTATTTGCATGGCTCTTGGAGAGGATACTTGCATTTATTCTCAGTACCAATTCTGCTTCACAATCAATGACTTCACCTTCCTTCTATCTTTATCCAGCTTTTCCATTTCTGATGTTCCTCTTGTTCCCTTTAGGCCTAATATTTGGCCATTTTGGCATAAAAATGGCATTTCGTTAG 3129 0.4142 MSQTQASTCSGGANIEVGATTILLSSKYRKKWRVLYTATGIVISLTKRGNYESPPSPLSSVPYTSLPASEPPARTSSVKSCVAIDVAPDTEEVKEEEDAEGHIRKNIERIVKEEDLKSLHNLGGVDLISSVLLRQRQHSEGDGNRNMLESTIPILGTSFCSFLLMNCKCNGYTILMLLIAAGLSFAIELKQEGPKYGWHDGFAIVFSVFLLVGGNSVANFWRERKMLKLAKRRNKLEFTVERGEESLEGVPLSDIMVLDKVCLRQGDEVPADGLLVSDDILELAEATKSKRGNPFLVSGSKVIRGQGWMLVTSVGSSLSYNPKRGGLLETLIEKPISYIDKSALLISVVITLVVFIRLICLKDGGNSGLPEMKGKVSVGLLMEILERVFLRPHGRVSILTGLVTFAILFVQHGMPLMVTISLKCQIDRVVSNQEAVLNDLSSFPTMGLVTVICIDASGGLMSNPKEVSRIWMGEKDIMSKVEEAETDQVVLDMLKQGVGLSVLNPELSLTPMCHPLVSWAKTNWEMDMKSFTEKFVIVKHSKLDSDKECSRVLAREIRCNEQVLHLHWSGTASTILEKCSSYYDSEGACHAMENQKIKFGQVIKEMEDDGLKSIAFAYRKTDAEELEQDELILLGVIGIKSTCQKSIKPALENLRKTVQIKLISRDDDILAVKGIACELGIEVPPDGIELEGEELQDLNEEARLHKMDGVLVMGSFHLKDLLLMIQEWQKNGEVVAFIGTRMMTNHTSILEEADVGIVHDSLGRIVDRDCFGISMQCFCALEPIVKAGRSIYHNIQKFIQLQLTCTISGLVISLITTISTGDSPLTAFQLIWVNVVMNILGGQMMVMELTSEEQLAKKPSQCRNQSIITKEIWKNIVIQVLYQVSVSIILEFGGHVMDREKHVRKTMIFNTFLLCQLANQLNTMQLLKLKHTQIVLQNYYFLVAFGGCLLMQVLMIEYAKGLSDCMRLNATGWAICVLVGAFSWVFAWLLERILAFILSTNSASQSMTSPSFYLYPAFPFLMFLLFPLGLIFGHFGIKMAFR* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1891 1042 MobiDBLite consensus disorder prediction 49 73 - -
Apr9g1891 1042 Gene3D - 636 767 IPR023214 -
Apr9g1891 1042 PANTHER CATION-TRANSPORTING ATPASE PLANT 84 1011 - -
Apr9g1891 1042 SUPERFAMILY Calcium ATPase, transduction domain A 244 316 IPR008250 -
Apr9g1891 1042 Gene3D - 212 314 - -
Apr9g1891 1042 Gene3D - 768 995 - -
Apr9g1891 1042 Gene3D - 315 469 - -
Apr9g1891 1042 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 996 IPR023298 -
Apr9g1891 1042 Gene3D - 505 635 IPR023299 GO:0000166
Apr9g1891 1042 PANTHER CATION TRANSPORTING ATPASE 84 1011 - -
Apr9g1891 1042 Pfam Cation transporting ATPase, C-terminus 823 990 IPR006068 -
Apr9g1891 1042 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 526 640 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1891 Apr-Chr9 27556051 27560101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1891 27 1012 Primary Pumps ATPases AT3G63380 30.982 6.60e-132 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1891 K01537 - gmx:102661547 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1891 9 27556051 27560101 Apr9g1891 9 27556051 27560101 ECH