Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1885 ATGGACGTGCTTTGGGGATTTTTGTCTGCTATTTCAAGAGATTTGGTGCGCGGAGTAGTGAATCAATTGCGTTATCCTTATTGCTTCAACAAATTTGTTGATGAACTTGAAAAAGAAGAAGGCAATTTGATTGCCACAAGAAATACCGTCCAAGACCGGGTTGCACATGCTCAAAAACAAGCCAAAAAGTCTACTGAAGTCGTTGAAAAGTGGCTGAATGACGCTAACAACGATGTAGAAAAAGTGAATCAATTGCTAACAGAGGCAAGAACCAAAAAGACTTGCTGTTTTGATCTCTGTTCAAATTGGATTTGGCGATACCAATTAGGGAAGAAGTTAGCAAAAAAAAGAAATGAACTTAAAGAATGCACTGAAAAAGGTAGACAACATATACAAATTGAACGCACTGCTACACTTCCTTCCAGTACGCTTGGTTTTCTCTCAGGAAATTGTTTGAATTTTGAGAGTAGAAAATCTGCACATGAACAGTTGATGGAGGCACTGAAAGATGATCAGGTTGGCATGATTGGATTGTTTGGGATGGGTGGTTGTGGTAAAACCACGTTGGCAATGGAAGTTGGGAGGGTAGCAGAGGCAGAACATCTCTTTGACAAAGTGCTTTTTGTGCCTGTTTCTAAAACGGTAGAAGTTCCAAGGATTCAAGAAAAAATTGCAAGTTCACTTCAATTTGAATTTCCATCTCCAGAAATTGAAGAAATTGAGAGAGCTCAACGCTTATTCCATAGATTAAAACAAGAAAAAAGGATTCTTGTGATTTTAGACGATGTGTGGCAGAGGCTTAATTTTAGAGCCATAGGGATTCCCTCTCATGAAGATCATAAAGGTTGTAAGGTTTTCATCACCACACGATCTGAAGATGTTTGTAAACTGATGGATTGTGAAAGAAAGGTTGCACTACAAATATTGAGCAATGAAGAAGCGTGGATGCTTTTCCAAAAGCAAGCAAATATATCTGAGGAAGCTTCCATTCCCTTGGAATTGGCAAGAGACATCTCAGATGAATGCAAAGGATTGCCTGTTGCCATTGCAGCTGTGGCTGGCTCTTTGAAAGGCAAGGAAGAAGTTTCTTGGAAGGTAGCTTTGAATAGATTGAGAAATTCGATACCAGTGAACATAGAAGAAGGTTTGCAAAATCCTTACAAGTGCCTCCAATTAAGCTATGATTATTTGGACACTGAAGAAACCAAGTCACTTTTAATGTTGTGTTCTGCATACCCTGAAGATTATGAAATACCAGTTGAAGAATTAACTACTTATGCTATAGGTCTAGGTTTAGGTGGAGAAGTTGGCTCATACGATGCAAAAAGGAATGAGGTAACTGCAGCTAAAAATAAGCTCATAAGTTCTTGTTTGCTGATAGCTGTTGAGCAGTGGATAGGTATTGTGCCACGGAATCATGTCAAAATCCATGACTTAGTGCGCGACGTAGTACAATGGATTGCCAAGCATGGGAATAAAGATGTGAATGAATACACTCAACCAAGATACCTATGGTGTGAGGAATTTCCAAATGAAAGTGACTGTTCCAATCTTGAATTTATAAGGACACAAACAAATGTGGAAGCATTGGATGAAATATTGAGAAGGATGAGAAAACTCAGAGTTTTGATTCTAGAAAATGTGGGGTCCCAGAAGCAATTGTCGATGATGTTACTCAAATCGATGACAAATCTGCGTTATCTAGCCCTTGAAGAATGGGAATTAAGCGACATCTCAATTGCAGAAGATAAATGGAATCTTGAAGGTCTTGCATTGATTAGATGCTCATTCCCTCAATTATTAAATGATGTTCTAGATAAAGAATTGTCATACTTGAAATTGTTAGAGATAGAGGATTGTGGCATGGAATGGAGTACTTTAGAAGTGATCCTAAGACTACCCCAACTGGAAGAATTGTACGTAGTCGACCGTCGAATAAAAAATAAAAGTGTTGTTTGCTCTGAAAACTTTGACAAGTTCGTTGTTCCACAGAGACTGCAACGGTATGACATCCTATTTGGAAGAGGATATGTTGTTACTTCTATTCCCACTCATGACCGAAATTTGTCGGTATATGAGTTTCACATGTCAAATGAAATTATCAAGGGTTTTGCAAGAAAAGCAGAGACTTTGCGACTGGGTTCTATGATGGGATGTGAGAAAAATATTATCCCTGACATATTTGGAACAGAAAGGGGAAGCATGAATGAGTTGAAAGGGCTTGGGGTGAATCGTTGTACAGAAATAGAGTGCTTAGTTGAAAACGACAAGCGGGAGATATTAAATGTCTTCTCCAATCTGATTCACTTACAAGTTGGAGGAATGGATCAGCTAAGAACCTTATGGCACGGTCGTTTGCCTCTCAGTGGGTCTTTTGAGAAATTAGAGTGGCTGCACATAGAGGAATGCCCAAAACTAACTTCTTTATTTGCTCTAAATGAATTCGAGCGACAGCTTCCTCTGCCATTCAATTTCTTCCAAAATCTTAAATTTGTTATCATAGCATCTTGTGGAGAATTGAAATACTTATTCTCAATCTGCGTGGAAGGAGACTTATCTGGATTGAAGGAGTCAGAATTAGATGAAATCATGGAGGATGAGAAGCCTCAGGTTTTTCCAAATCCTCATTTTGAATCTAATCAATATCAAAATTTGCGAGCAAGTACTCCTATTCCATCAACGTCATCCTTTGCCAACCACCGAGGATTATTCTCTTTGTCCAAGCTTACATCGCTTGTATTATCCGTCTGTCCGAAGTTGGGTTCCTTATTTACATCATCCATTACTAAAACCTTGATCTCGTTAGAAAGTTTGGAATTATTTAGATGTGATGAATTGAAAAACTTAATAGAGATTGACCACGACAAGAAGAGTTGGGATGCTGTCTTCCCAAAATTAAAAGAGCTCACTGTAGACTCCTGTGAACATCTGGAGTACATGCTTGGCCCATATCATCAGAGGATTCGTATCCTTCTCCCATCATTGGAAATTCTCGGACTTAGGAATTTATCCAATTTTATCAAATTAAACTCTTCTTCACAGACTTTAAAGGAGTTGAAAGATAGTTACGTGAATTCAGAGAATTCTTTCACTTTCCAAAATCTTAAGAAAGTGGAGATAATGAAATGTGAAAGATTGGAAGCAATTTTTCCTGCATCTTGTTTGAGATATAACCTACCAGAATTAGAGGTTCTGTGTATAATAGAATGCAACGAATTAAAGCAGATCATTGAAGAGGAAAACACAGAGAATCAGAATTTGTCAAATTTTCTACAGCCACAGCCATGCTTCCCAAAACTAAAAATGCTGTTTATTCAAAATTGCAACAAGTTGAAACGTTTCATCTCTGCATCTAAATGTGATCTTCCCAAACTACAGTTTCTAATCATAGGGGAAGCCTCTGAGTTAGAAGAACTAATTGGAGAAGGTGACGTGATAGGGAATGCGAAACTTGAGCTTCCAAAGCTGAATGCTTTAATATTTTGGAAATTGACAAAATTTCGCCAAGAGATTGAATCACATGTTGAGGTGGATCGTGTTGTCCATGATTGTCCAATTCTCTCGTCGACTCCAACTGCCATTCTTAAAGAACTCTTGTCAAAAATAGAAGATGATGTAATAAGAGAGTGTGATCTCTCAGACGAGATAGGGGAATCTCTTTTTAGAATGTTGTTGGATATAGAAATAGAGTATTTTCTTTATACAAGTTCATCGGATGAAGAGACTACATCGGGAGACACTGGCATTGAAGATCTGGGCGAAGCCACCGTAGATTCTTCAGATGACCCTAAATCTCGAAGAGCATCAGGAAGTGGGTCGCCTTCTTCACAAGTGAGTTATGCCAGCTGA 3849 0.3843 MDVLWGFLSAISRDLVRGVVNQLRYPYCFNKFVDELEKEEGNLIATRNTVQDRVAHAQKQAKKSTEVVEKWLNDANNDVEKVNQLLTEARTKKTCCFDLCSNWIWRYQLGKKLAKKRNELKECTEKGRQHIQIERTATLPSSTLGFLSGNCLNFESRKSAHEQLMEALKDDQVGMIGLFGMGGCGKTTLAMEVGRVAEAEHLFDKVLFVPVSKTVEVPRIQEKIASSLQFEFPSPEIEEIERAQRLFHRLKQEKRILVILDDVWQRLNFRAIGIPSHEDHKGCKVFITTRSEDVCKLMDCERKVALQILSNEEAWMLFQKQANISEEASIPLELARDISDECKGLPVAIAAVAGSLKGKEEVSWKVALNRLRNSIPVNIEEGLQNPYKCLQLSYDYLDTEETKSLLMLCSAYPEDYEIPVEELTTYAIGLGLGGEVGSYDAKRNEVTAAKNKLISSCLLIAVEQWIGIVPRNHVKIHDLVRDVVQWIAKHGNKDVNEYTQPRYLWCEEFPNESDCSNLEFIRTQTNVEALDEILRRMRKLRVLILENVGSQKQLSMMLLKSMTNLRYLALEEWELSDISIAEDKWNLEGLALIRCSFPQLLNDVLDKELSYLKLLEIEDCGMEWSTLEVILRLPQLEELYVVDRRIKNKSVVCSENFDKFVVPQRLQRYDILFGRGYVVTSIPTHDRNLSVYEFHMSNEIIKGFARKAETLRLGSMMGCEKNIIPDIFGTERGSMNELKGLGVNRCTEIECLVENDKREILNVFSNLIHLQVGGMDQLRTLWHGRLPLSGSFEKLEWLHIEECPKLTSLFALNEFERQLPLPFNFFQNLKFVIIASCGELKYLFSICVEGDLSGLKESELDEIMEDEKPQVFPNPHFESNQYQNLRASTPIPSTSSFANHRGLFSLSKLTSLVLSVCPKLGSLFTSSITKTLISLESLELFRCDELKNLIEIDHDKKSWDAVFPKLKELTVDSCEHLEYMLGPYHQRIRILLPSLEILGLRNLSNFIKLNSSSQTLKELKDSYVNSENSFTFQNLKKVEIMKCERLEAIFPASCLRYNLPELEVLCIIECNELKQIIEEENTENQNLSNFLQPQPCFPKLKMLFIQNCNKLKRFISASKCDLPKLQFLIIGEASELEELIGEGDVIGNAKLELPKLNALIFWKLTKFRQEIESHVEVDRVVHDCPILSSTPTAILKELLSKIEDDVIRECDLSDEIGESLFRMLLDIEIEYFLYTSSSDEETTSGDTGIEDLGEATVDSSDDPKSRRASGSGSPSSQVSYAS* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1885 1282 MobiDBLite consensus disorder prediction 1266 1282 - -
Apr9g1885 1282 Coils Coil 72 92 - -
Apr9g1885 1282 PANTHER - 22 641 - -
Apr9g1885 1282 PANTHER - 901 1087 - -
Apr9g1885 1282 Gene3D Ribonuclease Inhibitor 1026 1144 IPR032675 -
Apr9g1885 1282 Coils Coil 1070 1090 - -
Apr9g1885 1282 Gene3D - 147 305 IPR027417 -
Apr9g1885 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 407 IPR027417 -
Apr9g1885 1282 SUPERFAMILY L domain-like 475 1074 - -
Apr9g1885 1282 MobiDBLite consensus disorder prediction 1238 1282 - -
Apr9g1885 1282 Pfam NB-ARC domain 160 395 IPR002182 GO:0043531
Apr9g1885 1282 Gene3D - 393 486 IPR036388 -
Apr9g1885 1282 CDD AAA 157 289 - -
Apr9g1885 1282 Gene3D Ribonuclease Inhibitor 501 671 IPR032675 -
Apr9g1885 1282 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 901 1087 - -
Apr9g1885 1282 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 22 641 - -
Apr9g1885 1282 Gene3D Ribonuclease Inhibitor 687 1020 IPR032675 -
Apr9g1885 1282 Gene3D - 309 392 IPR042197 -
Apr9g1885 1282 PRINTS Disease resistance protein signature 175 190 - -
Apr9g1885 1282 PRINTS Disease resistance protein signature 250 264 - -
Apr9g1885 1282 PRINTS Disease resistance protein signature 342 356 - -
Apr9g1885 1282 PRINTS Disease resistance protein signature 904 920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1885 Apr-Chr9 27501064 27506006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1885 176 505 WRKY Transcription Factor Family AT5G45050 24.779 1.51e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1885 - - aprc:113874607 2489.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1885 9 27501064 27506006 Apr9g1885 9 27501064 27506006 ECH