Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1881 ATGTCTTCTACTTCTTCTTCGTCATCATCATCATCATCAACAACTTCAACCCCATTTGACGCTGCACCAAATGTTGCTACTGATATTCCAGGCCCTAGTACGAGGAGGACCCGTCAATTTGAAGGCCCTTCTTCCTCTCGTCAACGTGCTATGAATGAGGCCTTGCCTGAGCCTATTCTCGAAGCTTTGGCCACCCAAGTTGCCATTGATGCTGCTCACTACAATGGACGTCTTGCTGCTGCTTCTGCCATTTCCATTCTTTTTCAGGTTTGTTCTACATGGCGAGATGTGTCGCACTCGGATCTGCTGTGGCAGCGCCTCACAAGACGAATCTGGCGCCACGCCCAGCGATCCAGGCCCACGTGGCGCCAGGAATTTATCTACTGGCATCGGACGGCTAGGAACTTCGCCACAGGGAGACACTCTTACATCATCCCACACTTGGACCCTTCCGATCACCACCAAGGCCTCATTTGCCGGTACCTCGCTCTCTCCGACACACACCTCGCATGTGGCTACGTCGACGGCACCGTTCGTCTATTCGACCTCGAAACCCGCGCCCACGTCAGCACCTTTGTTTCCGCACACGGCCACCTCTTCGGGCGCTTTTCGCGCTCCGTTTCCGGGATAGTCATCGTCTCAAACTCTCTCACCTTCGCCAGGCTGGACGGCGACGTTTACGTGGATGTCATTAATGGGCCTGGGCCCAGCCACGCGCACCGGGCCGTGGCAGGTGACGTGGTTAATAACGGCGTGTTGGTTGAGTTCACCGGGTGCGGACGCTGGTGGGTGGGCCTATTCGCGGGCATTGCGGGCCGCGCTTTTCAGATTTGGGATGCCAACAGTGTGGAGCGCGTGTTCGTTGGGGGGTTGTTAACGGACCCGGAGACGGTTATGGGATGGCACATGCTGACGGAGTTAGTTGAACCGGTGGGTCGAGTGCGCGTAACAGAGGGCGAGTTTGTTGTGGCGTGCACGAGTTCAAGGCTGGTTAGTTTCAGTTTGAACAACCCAGAGTTTTTGGAGCTTGATTTGGGGTCTAACACGGGTTTTGTGGTGACCTCGCTTGACACAAGCCACGATGCATTTGTTGTGGTGGAGAGGAGCGGTGTGGGAACGGTTCGGCGCGCCGGGACTTTCGAGCGGCTGAGCCGGTTTCGGCGAAGGGGTTCGTGGGTTCGGGGGTTGTGGGGGTGCATGAACCTTGGCTATGTCTTAACCTATTCTGCTGCTGCTCCTGCTAGTTTGTTGAGGGTGTGGAACATTGAGCACATTGAAGGACAGTTGTGCGTGGAACTTGCTGTTAGACCTGGAGAGGGAAATAGCATGGTGGCTAATGACAGACACGTGGCCATTTCCTGGAATGACACTTCTATACACTTATTGGATTTTGGTGTACAGGATTGA 1407 0.5501 MSSTSSSSSSSSSTTSTPFDAAPNVATDIPGPSTRRTRQFEGPSSSRQRAMNEALPEPILEALATQVAIDAAHYNGRLAAASAISILFQVCSTWRDVSHSDLLWQRLTRRIWRHAQRSRPTWRQEFIYWHRTARNFATGRHSYIIPHLDPSDHHQGLICRYLALSDTHLACGYVDGTVRLFDLETRAHVSTFVSAHGHLFGRFSRSVSGIVIVSNSLTFARLDGDVYVDVINGPGPSHAHRAVAGDVVNNGVLVEFTGCGRWWVGLFAGIAGRAFQIWDANSVERVFVGGLLTDPETVMGWHMLTELVEPVGRVRVTEGEFVVACTSSRLVSFSLNNPEFLELDLGSNTGFVVTSLDTSHDAFVVVERSGVGTVRRAGTFERLSRFRRRGSWVRGLWGCMNLGYVLTYSAAAPASLLRVWNIEHIEGQLCVELAVRPGEGNSMVANDRHVAISWNDTSIHLLDFGVQD* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1881 468 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 2 467 - -
Apr9g1881 468 Gene3D - 108 375 IPR015943 GO:0005515
Apr9g1881 468 MobiDBLite consensus disorder prediction 1 22 - -
Apr9g1881 468 PANTHER WD40 REPEAT PROTEIN 12, 37 2 467 - -
Apr9g1881 468 SUPERFAMILY WD40 repeat-like 153 463 IPR036322 GO:0005515
Apr9g1881 468 SUPERFAMILY F-box domain 87 135 IPR036047 GO:0005515
Apr9g1881 468 MobiDBLite consensus disorder prediction 30 50 - -
Apr9g1881 468 MobiDBLite consensus disorder prediction 1 50 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Apr9g1881 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1881 - - gmx:100781108 675.241