Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1868 ATGCCGGGAACTTTAAATCTCATGCCCCTCGCCGGTGCCGGCGGGACACTCCGGCTATCCTCCGAAGGATGCTCCATCTCCGGCGGCTTCATCCGGCCTCCGATTTCAAAGCCACCCAACCAATGCAGGGGTTCGATTCAGGCTTTCGCAGCGACGGCGTCGGCGATCGATTCGCGGCGGCCGGCGAGTCTCTACGAGGTGCTCCGGATCAAGCAGAACGCGTCTGCCGTGGAGATAAAATCAGCATATCGGAACCTAGCGAAGGTGTATCACCCTGATTCGGTGCTCAGGCGATCGGAATCGGACGAAAGGGACTTCATCGAAATCCACGACGCTTACGAGACGCTATCAGATCCTTCGGCCAGAGCACTGTATGATTTGTCGCTGATGGCAGCGCACGGCGGTAGTCTTTCGTTCTCGTCTTCGGTGGCTCCGAATGAGTCTTGCGGGTTCTACCAGACCCGTAGATGGGAAACGGATCAGTGCTGGTAG 492 0.5793 MPGTLNLMPLAGAGGTLRLSSEGCSISGGFIRPPISKPPNQCRGSIQAFAATASAIDSRRPASLYEVLRIKQNASAVEIKSAYRNLAKVYHPDSVLRRSESDERDFIEIHDAYETLSDPSARALYDLSLMAAHGGSLSFSSSVAPNESCGFYQTRRWETDQCW* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1868 163 PRINTS DnaJ domain signature 65 83 IPR001623 -
Apr9g1868 163 PRINTS DnaJ domain signature 83 98 IPR001623 -
Apr9g1868 163 PRINTS DnaJ domain signature 101 121 IPR001623 -
Apr9g1868 163 Pfam DnaJ domain 64 126 IPR001623 -
Apr9g1868 163 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 41 163 - -
Apr9g1868 163 ProSitePatterns Nt-dnaJ domain signature. 106 125 IPR018253 -
Apr9g1868 163 ProSiteProfiles dnaJ domain profile. 63 129 IPR001623 -
Apr9g1868 163 CDD DnaJ 65 118 IPR001623 -
Apr9g1868 163 SUPERFAMILY Chaperone J-domain 63 142 IPR036869 -
Apr9g1868 163 SMART dnaj_3 62 121 IPR001623 -
Apr9g1868 163 Gene3D DnaJ domain 50 141 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1868 Apr-Chr9 27383052 27383846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1868 65 126 C2H2 Transcription Factor Family AT1G74250 45.455 1.43e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1868 - - aprc:113848328 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1868 9 27383052 27383846 Apr9g1868 9 27383052 27383846 ECH