Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1866 ATGAACGACGATTCTGCGTACAGAGTCGAAACTACATGTCGTATGGCACGATGGACAATCCACAACTTAGCCTCTTCCACTTACCGCAAATCCGATCCTTTCCGAATAGCCATGTGGAATTGGCATTTATCAGTGGAGAAGAACCGGGTTTCGTGTGTTAAATTATACCCAGAAATATCCAATCTAACCAGAGACAATCCCCCTATTGCATCTTTCATCGTTCGCTTGCTTACTTCTGTTCGAGATCGCAAGGCCTTAGCCATTTCAGGTCACCCAAAAATAAAAGAGAAATTGCTTAACAACCGCGAAGGCTTTGTTTGGGAAATTGAGGTCCCACTGCCTACAAAATTCATTATTGACATAGAGTTCCTGGATTTGAGGACTTCATCTCCAAACGGTGGAGAACCTTGCTCTATCTGGCCTAGTAGATTTTTGCAGCAAAGATTGAATGCAACATCCCTTGATTCTCTTGGTAGAATGCTAACAGAAGGCATACACACAGACATCACAATTAATGCCAATGATTGTGATGGAAGCATAAGAGCCCACCGGGCTATTCTTGCTGCTCGTTCACCTGTTTTCCACAGCATGTTCTCACATAACCTTAAGGAGAATGATCTTTCTACCATAAATATCTCAGACATGTCAAATGATGCTTGCCAAGCATTTCTAAATTATCTTTATGGGACCATTAAAGATGAAGAATTTCTGACCCATAGGCTGGCCCTACTGCATGCAGCTGACAAATATGACATCCATGATTTGAGAGAGACATGTCATGAGAGTCTGCTAGAAGATATTGATTCAAATAATGTACTTGAGAGGCTCCAAAATGCTTATATCTATCAATTGTCAAACCTGAAGAATAGTTGTATGCAATATCTTGTAAAATTTGGTAAAATATTTGACATTTGGGATGATTTCACTTGCTTCTTGCAAAGTGCAGACAGGGATCTGATTTCTGAAGTCTTCCATGAAGTTCTTAATGCCTGGACAGGATTATGA 1005 0.405 MNDDSAYRVETTCRMARWTIHNLASSTYRKSDPFRIAMWNWHLSVEKNRVSCVKLYPEISNLTRDNPPIASFIVRLLTSVRDRKALAISGHPKIKEKLLNNREGFVWEIEVPLPTKFIIDIEFLDLRTSSPNGGEPCSIWPSRFLQQRLNATSLDSLGRMLTEGIHTDITINANDCDGSIRAHRAILAARSPVFHSMFSHNLKENDLSTINISDMSNDACQAFLNYLYGTIKDEEFLTHRLALLHAADKYDIHDLRETCHESLLEDIDSNNVLERLQNAYIYQLSNLKNSCMQYLVKFGKIFDIWDDFTCFLQSADRDLISEVFHEVLNAWTGL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1866 334 CDD BTB_POZ_ZBTB_KLHL-like 166 250 - -
Apr9g1866 334 SMART BTB_4 167 267 IPR000210 GO:0005515
Apr9g1866 334 ProSiteProfiles BTB domain profile. 167 228 IPR000210 GO:0005515
Apr9g1866 334 Gene3D Potassium Channel Kv1.1; Chain A 146 297 IPR011333 -
Apr9g1866 334 SUPERFAMILY POZ domain 151 265 IPR011333 -
Apr9g1866 334 PANTHER OS08G0495500 PROTEIN-RELATED 1 333 IPR044714 -
Apr9g1866 334 Pfam BTB/POZ domain 160 265 IPR000210 GO:0005515
Apr9g1866 334 PANTHER OS08G0495500 PROTEIN 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1866 Apr-Chr9 27375905 27378179 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Apr9g1866 BTB 7.6e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1866 K10523 - gmx:100790186 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1866 9 27375905 27378179 Apr9g1866 9 27375905 27378179 ECH