Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1864 ATGCCAACTCTCTCTCCCTCTCCCTTAGAGCAAACTACACAAGCCTCTCTTGAAAAACATGACATATCAAAACAACTAAGGAATCAACATTCTCGGGTATCAGAAGCACCAAATTCCCTTACCAACCCTCGGGTAATACTTGGACAACCTCAACTTCAAAGGACCAAACCAATTATATGGTGTGCTGCAGTGCTGTGCTTCATATTCAGCCTTGTACTTATCTTCTTTGGAATTGCAACATTGATTGTATACTTTGCCATCAAACCAAGAAACCCCACGTTTGACATTCCCAATGCAAGCCTCAATGTAGTATATTTTGACTCACCACAGTATCTCAATGGTGAATTCACTCTCCTTGCAAATTTTTCTAATCCTAACAGGAGATTTCACGTGAGGTTTGAGTCCTTGAAAGTTGAGCTTTTCTTCTCAGACAGGCTCATATCATCACAGTCAATCAAGCCTTTTACTCAGAGGCCAAGGGAAACCAGGTTGCAACCAGTGAACTTCATATCTAGCTTGGTGTTTTTGCCTCAAGATGTTGGTGTGAAACTTCAAAGGCAGGTGCAAAACAACAGGGTCAACTACAATGCAAGGGGTACATTTAAGGTGAGGGTCAACATGGGACTAATCCATATATCTTACTGGCTGCATAGCATATGCCAGATTGAGATGACATGTCCACCAACAGGAATTCTAGTAGCCAGACAATGCGTAACATATCGATGA 726 0.4187 MPTLSPSPLEQTTQASLEKHDISKQLRNQHSRVSEAPNSLTNPRVILGQPQLQRTKPIIWCAAVLCFIFSLVLIFFGIATLIVYFAIKPRNPTFDIPNASLNVVYFDSPQYLNGEFTLLANFSNPNRRFHVRFESLKVELFFSDRLISSQSIKPFTQRPRETRLQPVNFISSLVFLPQDVGVKLQRQVQNNRVNYNARGTFKVRVNMGLIHISYWLHSICQIEMTCPPTGILVARQCVTYR* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1864 241 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 28 241 - -
Apr9g1864 241 Pfam Late embryogenesis abundant protein 123 203 IPR004864 -
Apr9g1864 241 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 28 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1864 Apr-Chr9 27354802 27355527 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1864 - - pvu:PHAVU_008G282100g 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1864 9 27354802 27355527 Apr9g1864 9 27354802 27355527 ECH
Apr10g1719 10 30027501 30028253 Apr9g1864 9 27354802 27355527 PCT