Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1855 ATGGAGAACGGAAGAGAAGATGAGATTGAAGACATGCCAATGTCACCCCCATCCACGGGCTCCATGCAGATTGCAGGGAGCAATGGCTTTGGTCATAGCATGGAGTACATGTCTCAGGCATACCTTCCGAATAGGTACTCAGAGATTGACATAAAAGTTGAGGATTCTAGTTTCAACCAAGATCCACCCCTCCCCATATATCTCAAGTTTGAAGATGTAGAGTTTAAGGTGAGAAATAGTCAAACAGCTTCCAAGAACCCTGTGAAGACAATGATGTCAAAAGTAGCCACACAACAACATGTGGATGAAGATAAATACAAGAAAATATTGAAGGGTATCACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGGAAGACAACCTTGTTGAGAGTTGTGGGAGGAAGATTACTTGAGAATGTAAAGGGGAAAATAACTTATAATGATGTTAGATTTAATCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAAGAAACGTTAATCTTCTCTGCATTCCTAAGACTGCCATCCAATATGAGCAAGCAACAAAAATATGCAAGAGTGGAGACCACTGTCAAGGAGCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATTTCTCAAAGGCATATCAGGAGGAGAAAGGAAGCGAACCAGCATAGGCTACGAAATTCTTGTTGATCCTTCACTCTTGCTACTTGATGAACCAACATCAGGCCTTGATTCCACCTCAGCAAACAAACTCCTTTTCACTCTTCAGGGACTTGCCAAGGGTGGAAGGACCATAATCACAACAATTCATCAGCCATCCAGCAGAATTTTTCACATGTTTGACAAACTACTACTGATATCAGAAGGCTATCCCATTTACTATGGGAAGGCTAGGGACACGATGCAGTACTTTTCATCCTTGAGGTTCATCCCCGAAATACCAATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGACAAGCGAATAACATAAGCGTTCCACAAGATATTTTGGAAGATCAAGAATCAGCTGATTCTTCAAAAGCTATTATTAAACGTCTACAACTCATTTATAAAGACAAACTGGAGCCAAAAGAAAAAGAAGAAAATCACGGAGCAACAAACGCACCAGAACATCTTCAGCTGGCCATTCAGGTTAAAAAGGATTGGACACTGAGTTGGTTGGACCAATTCACTATTCTTTATAAGCGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAACTAAGACTAGTTCAAGCACTTGGCATTGCACTTTTGTTGGGATTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAACTTAGAGATCAGGTTGGTTTGATGTTCTATATCTGTATATTCTGGACATCTTCATGCCTTTTTGGAGCAGTCTATGTCTTTCCCTTTGAAAATGTCTACTTGGTGAAAGAAAGAAAAGCAGACATGTACAGACTAAGTGTATACTATGCAAGCAGCACTCTGTGTGACATGGTGGCACATGTTTTCTATCCCACTTTTTTCATGCTAATCCTATACTTCATGGCTGGCTTTAAAAGGACTGTTGCGTGCTTCTTCTTGACATTGTTTGCCGTGCTGTTAATAGCTATCACAAGTCAAGGGGCTGGAGAACTTTTTGGAGCTGCTGTTATGAGCATTCAAAGAGCAGGGATGGTTGCTTCTTTGATACTAATGTTATTTCTTCTCACAGGTGGCTACTATGTTCAGCACGTGCCAAAGCTGATGCAGTGGTTGAAGTATTTGTCGTTTGTGTACTATGGATTTAGACTTCTTCTGAAAGTGCAGTATTCAGGAGAGCAACTATATGAGTGTGAAAGCGAGGGAGGGTGTAGAACACTGCAGAGTTCACCATCATTTGACACTGTAAACTTGGAAGGAGGCTTAACTGAAGTATGGGTTTTGTTAGCCATGGCTCTATGCTTTCGCATCTTTGCTTACTTCTGTCTTCGAAAACGAATTGACATTATTCGCAATTAG 2064 0.4142 MENGREDEIEDMPMSPPSTGSMQIAGSNGFGHSMEYMSQAYLPNRYSEIDIKVEDSSFNQDPPLPIYLKFEDVEFKVRNSQTASKNPVKTMMSKVATQQHVDEDKYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLENVKGKITYNDVRFNPAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPSNMSKQQKYARVETTVKELGLERCRHTKIGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLFTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKARDTMQYFSSLRFIPEIPMNPAEFLLDLATGQANNISVPQDILEDQESADSSKAIIKRLQLIYKDKLEPKEKEENHGATNAPEHLQLAIQVKKDWTLSWLDQFTILYKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCLFGAVYVFPFENVYLVKERKADMYRLSVYYASSTLCDMVAHVFYPTFFMLILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHVPKLMQWLKYLSFVYYGFRLLLKVQYSGEQLYECESEGGCRTLQSSPSFDTVNLEGGLTEVWVLLAMALCFRIFAYFCLRKRIDIIRN* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1855 687 Pfam ABC transporter 110 260 IPR003439 GO:0005524
Apr9g1855 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 332 IPR003439 GO:0005524
Apr9g1855 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 4 682 - -
Apr9g1855 687 MobiDBLite consensus disorder prediction 1 20 - -
Apr9g1855 687 Pfam ABC-2 type transporter 289 349 IPR043926 GO:0140359
Apr9g1855 687 CDD ABCG_EPDR 65 314 - -
Apr9g1855 687 SMART AAA_5 119 310 IPR003593 -
Apr9g1855 687 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
Apr9g1855 687 Gene3D - 96 327 IPR027417 -
Apr9g1855 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 325 IPR027417 -
Apr9g1855 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 4 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1855 Apr-Chr9 27277818 27280973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1855 108 293 Calmodulin-binding Proteins AT2G36910 29.843 1.39e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1855 K05681 - gmx:100815259 1234.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1855 9 27277818 27280973 Apr9g1855 9 27277818 27280973 ECH