Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1833 ATGGGGTTGTCTTCTAGAGTTGTGTTCTTGTTTGTTTTGGTTTTCCTGATGTGGGTTCAGGTGGATTTAGCAGAAGGTAGCAATGGCCATGGTGTTGTCAGGGATTACATTAGTTGGGAAGATCTGCAGGTGGATGAACAAAGGTTGACCTTGAAGTCAAATAACGAGGTTCGAGTTATCATTGTTGACCAGAATGGCAAGGGGCATTCGAAAACTGTTCAAGGAGCAGTGGATTTGGTTCCAGATAATAACAGAAAAAGGGTGAAAATTTACATCTATCCAGGAATTTACAGAGAAAAAGTGTTTGTGCCTGTCACCAAGCCTTATGTATCATTTATAGGTAAAAGAAATCGAACAGAAAGTGCTGTTATTACTTGGAACAGTAAGTCATCTGATAAAGGTCCAAATGGTCAAGCATTGGGCACCTATGATTCAGCAACTGTGGCAGTGGACTCAAATTATTTCTGTGCAACTGAGGTCACTTTTGAGAACACGGTGGTCGCAGCTCCTGGTGGGAAAGGGATGCAAGCAGTGGCATTGAGGGTAAACAGTGAAAGAGCCGTGTTCTACCGAGTGAGGATTAAGGGAACACAGGACACTCTTTTGGACAACGAAGGAAAACATTACTTCTTGAAGTGTCGCATACAAGGAAAAGTTGACTTTATCTGTGGCAATGCAAAATCACTTTTTGAGAAGTGTCGTCTTCAATCAATAGCTGAGAACTATGGAGCAATAGCAGCACATCACAGAGATAAACCAGATGATTCAGGTTTTTCTTTTGTGGGGTGCAGCATTAGAGGAACCGGCAGTGTGTACCTTGGCAGAGCATGGGGGAAGTACTCAAGAATTATATACTCCAATTGTAATATGGATGGTATTATTAATCCTGAAGGATGGTCAGAATTTAATCATCCAGAAAGAAGGAAGACTGCAGTGTTTGGTGAGTATCAATGCAAGGGAAGAGGAGCAGATAGAAGACACCGGGTGCCTTGGTCAAAATCATTCAGTTATCAAGAAGCAAGGCCTTTCCTGGACAAGAGCTTCATAGATGGAGACCAGTGGCTTAGACTGTAG 1074 0.4246 MGLSSRVVFLFVLVFLMWVQVDLAEGSNGHGVVRDYISWEDLQVDEQRLTLKSNNEVRVIIVDQNGKGHSKTVQGAVDLVPDNNRKRVKIYIYPGIYREKVFVPVTKPYVSFIGKRNRTESAVITWNSKSSDKGPNGQALGTYDSATVAVDSNYFCATEVTFENTVVAAPGGKGMQAVALRVNSERAVFYRVRIKGTQDTLLDNEGKHYFLKCRIQGKVDFICGNAKSLFEKCRLQSIAENYGAIAAHHRDKPDDSGFSFVGCSIRGTGSVYLGRAWGKYSRIIYSNCNMDGIINPEGWSEFNHPERRKTAVFGEYQCKGRGADRRHRVPWSKSFSYQEARPFLDKSFIDGDQWLRL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1833 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 357 - -
Apr9g1833 357 Pfam Pectinesterase 60 352 IPR000070 GO:0030599|GO:0042545
Apr9g1833 357 SUPERFAMILY Pectin lyase-like 59 355 IPR011050 -
Apr9g1833 357 PANTHER PECTINESTERASE QRT1 16 357 - -
Apr9g1833 357 Gene3D - 54 357 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1833 Apr-Chr9 27121194 27122797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1833 8 309 Carbohydrate Esterase AT5G55590 52.632 2.47e-119 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1833 K01051 - gmx:100804220 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1833 9 27121194 27122797 Apr9g1833 9 27121194 27122797 ECH