Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1832 ATGGGGTTACCAGTTTTGTTTTTTCAAGTTTTGTTGTTGGTGTGTGTTAAGGTGCAAGGTGGAGATAGTGATGATGGTAGGAACTTCATTACTTGGGATGATTTCATGGTGAATGAACATGGTATCGCCTCCAATGGAGGGGGTCGAGTTATCGTGGTTGATCAAAGTGGTAATGGAGATTCAACAACTGTTCAAGGGGCTGTGGATATGGTTGCTGAAAACAACACACAAAGGGTGAAGATATATATTTATCCTGGAACTTATAGAGAAAGAGTGCATGTGCCGAAAAGCAAGCCGTTTATTTCATTTATAGGTAAACCTAATATAACAATGAATGGCAATGAACGAAATGTAACAGTTAATGCCAATGCATTAAATGTTACGGACATTGGCAATGCCATACCAATTATCACAAACAGTACTAAGGCATCAGACAAAGGCTCAGATGGTCAAGAAATGGGCACTGTTAGTACAGCAACTGTATGGGTAGAATCTGATTTGTTTTGTGCCACTGCTCTTACTATTGAGAATTTGGTAGATAAAGATGCATATAAACGTCAAGCAGTAGCGTTGCGTGTAGACGGTGATAAAGCTGTATTTTACAGAGTTAGGCTTGTGGGAGAACAAGACACCCTCTTAGATAACACAGGAACCCATTATTTCTACCGAAGTTTCATTCAAGGATCCGTTGATTTTATATGTGGCAACGCAAAATCATTGTTCCATGAATGTGTACTAAACTCTGTAGCTGAGTTTTGGGGAGCAATTGCAGCTCATCACAGAGATTCAGCTGATGAAGACACAGGATTTTCATTTGTTGGGTGCAAAATCAAAGGAACCGGAAGTATCTTTCTTGGGAGAGCTTGGGGAGAGTATGCTACAACAATATATTCTTATTGTGACATGGGTGATATCATTAACCCATTGGGATGGAGCGATTGGGATAATCCATCTAGACAAGAGACTGCTATGTTTGGGGAGTACGAATGCTCAGGAAAAGGATCAAACAGAACTGAGAGGGTGGGATGGTCAAAAGCTTTGAGCAGTGATGAAGCTAAGCCTTTCCTTAGCAGAGACTACATATATGGAGATAGATGGCTTAGACTATAG 1110 0.4045 MGLPVLFFQVLLLVCVKVQGGDSDDGRNFITWDDFMVNEHGIASNGGGRVIVVDQSGNGDSTTVQGAVDMVAENNTQRVKIYIYPGTYRERVHVPKSKPFISFIGKPNITMNGNERNVTVNANALNVTDIGNAIPIITNSTKASDKGSDGQEMGTVSTATVWVESDLFCATALTIENLVDKDAYKRQAVALRVDGDKAVFYRVRLVGEQDTLLDNTGTHYFYRSFIQGSVDFICGNAKSLFHECVLNSVAEFWGAIAAHHRDSADEDTGFSFVGCKIKGTGSIFLGRAWGEYATTIYSYCDMGDIINPLGWSDWDNPSRQETAMFGEYECSGKGSNRTERVGWSKALSSDEAKPFLSRDYIYGDRWLRL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1832 369 SUPERFAMILY Pectin lyase-like 48 367 IPR011050 -
Apr9g1832 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 369 - -
Apr9g1832 369 Pfam Pectinesterase 115 364 IPR000070 GO:0030599|GO:0042545
Apr9g1832 369 Pfam Pectinesterase 51 106 IPR000070 GO:0030599|GO:0042545
Apr9g1832 369 PANTHER PECTINESTERASE QRT1 11 369 - -
Apr9g1832 369 Gene3D - 49 369 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1832 Apr-Chr9 27113720 27116520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1832 5 321 Carbohydrate Esterase AT5G55590 51.884 1.50e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1832 K01051 - gmx:100812850 624.78