Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1824 ATGTTGTCTGTTTTTTCTAACCTTTCCCTCATGCACTTTGCAACTGGTTTTCTCTTCAAACCCAATTTTCTTCATGGCTTATCTGGCTTTCTCCACCTACTGTTGTTGGTGGCGGTTTTGGTTTCATGGGTTTGGAAGAAAATCACTGTAGGTGCTAGGGATGAGTCTAAGGAGAAATCCAATAGCACTCTCTTTAAAACGACTGTGTTTTGTGCTCTTGGTGTTTCTGCTTTCAGTGTTGTGCTCTTCTTGTTCAATTACTTCTATTGGTATAGAAGTGGTTGGACAGAAGAAAAGCTCGTGACCCTTTTAGATTTGGCGTTCAAAACAGTTGCTTGGGGTGTTGTTTGTGTTTGCTTACACAACGGGTTCTTCAGTTCGGGTGAAAGGAGGTTCTCATTCTTCTTCAGAGCTTGGTGTGTCTTCTACCTCCTTATTTCTTGTTATTCCTTCGTAGTGGACATTGTTGTTCTCTATGAAAAAAATGTTGTTTTACCAGTTCAGTACTTGGTTTGTGATTTAGTGTCTACTTGTGCGGGCTTGTTTTTCTGTTACGTGGGGTATTTTTTGAAAAACGAAGGCCAAGATAACATTCTTCAAGAGCCTCTTTTGAATGGTGATACAAATGTTGGTAATGCCTTGGAGTCAAAAGAGACCAAGGGGGGTGACACTGTTACTCCTTATTCAAATGCTGGACTTCTCAGCAGTCTTACGTTCTCTTGGGTGGGTCCTCTTGTAGCTGTTGGCAAAAAGAAGACATTGGACCTTGAGGATGTTCCTCAACTAGATAGTGGAGATAGTGTAGTTGGTGCATTTCCAAGTTTCAGAGACAAACTTGAAGCTGATTGTGGTGCAATTAATAGTGTGACCATACTTAAGCTGGTGAAGTCAATAATTGTGTCATCGTGGAAGGAGATTCTTTTCACAGCTATTCTTGCATTGTTGAACACATTGGCTTCTTATGTTGGTCCTTATCTTATTGATGCTTTTGTCCAGTACCTTGATGGACAACGGCAATATGAAAACCAGGGCTATGCTTTGGTTTCTGCGTTTTTCTTTGCAAAGATTGTAGAGTGTCTCACTCAAAGGCATTGGTTCTTTAGGTTGCAGCAAGTTGGAATTCGAATTCGATCACTGCTTGTCACAATGATCTATAATAAGACTTTGACTCTTTCTTGTCAATCAAGGCAGGGCCACACTTCTGGGGAAATAATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGTGTCTTCAGTTGGTACATGCATGATTTGTGGATGGTGGCTCTGCAAGTTACATTGGCCTTGCTGATTTTGTATAAGAACCTTGGCCTTGCTTCGATTGCTGCTTTCATTGCAACTATCGTTGTTATGTTGGCAAATGTTCCATTGGGATCATTGCTAGAGAAGTTTCAAGATGAGTTGATGAAGTCAAAAGATACAAGAATGAAGACCACATCTGAGATTTTAAGGAACATGAGGATCCTGAAACTACAAGGCTGGGAAATGAAGTTTCTATCTAAAATAACTGAACTCAGGAAAACTGAGCAAGGCTGGTTAAAAAAATATGTTTATAGTGCAGCCATAACAACGTTTGTGTTTTGGGGTGCCCCTACATTTGTATCTGTGGTTACTTTTGGTACTTGTATGCTAATGGGGATCCCACTTGAATCAGGGAAGATCTTGTCTGCACTTGCAACTTTCCGGATTCTTCAAGAGCCCATTTATAATCTTCCAGATACAATTTCAATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTGCATCATTCCTTCGTCTTGATGACTTAAGGTCTGATATTGTAGAGAAACTTCCTTGGGGTGGTTCTGATATGGCAATTGAAGTAATTGATGGGAACTTTTCTTGGGATTTATCTGCCTCTGATCCAACGTTACAAAACATAAATCTCAGAGTTTTTCATGGGATGAGGGTTGCTGTCTGCGGTACTGTTGGATCGGGCAAGTCTACTTTGCTTTCTTGTGTATTGGGAGAAGTACCAAAAATATCAGGCATTCTTAAGGTTTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATACAAAGTGGCAAGATAGAGGATAATATATTGTTCGGCAAACACATGGATAGGGAAAGGTACGAGAAGGTACTTGAAGCCTGTTCTCTGAAGAAGGATCTGGAGATTTTGTCATTTGGTGATCAGACCATTATAGGAGAGCGTGGAATAAATTTAAGTGGTGGACAGAAACAAAGAATACAAATTGCACGTGCTCTTTACCAAGATGCTGATATGTATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGTTCTCACCTCTTTAAGGAATGCTTGCTGGGCTTTTTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATATTGGTAATGAAAGATGGGAGAATTACTCAATGTGGAAAGTATGATGATCTTCTTAGCAATGGTACCGATTTTTTGGAACTTGTTGGTGCGCACAAAAAAGCACTCTCCACACTAAATTCATTGGATGGAGAGACAGTATCTAATGAAATAAGTGCTTCGGAACAAGATGTTAACGTCTCTGCCACTCATGATGTTCAAGAAAAAGAAGCAAACAAAGATGAGCCAAATGGCAAAACAGATGACACGAGTGAACCAAAAGGTCAGCTTGTTCAAGAAGAAGAAAGAGAAAAAGGTAAAGTTGGGTTTTCTGTCTACTGGAAATATATCACAACGGCATATGGAGGGGCTCTAGTACCATTCATTTTGTTAGCTCAGATTCTTTTTCAAGCTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCGACTCCCATTTCATCAGATGTGGAGCCACCTGTTGGAGGAACGACTCTTATAGCAGTCTATGTTGGTTTGGCCATTGGAAGTTCTTTATGCATCCTTGTCAGAGCACTGCTTCTTGCCACAGCTGGTTATAAGACAGCTACTATTCTCTTTAATAAAATGCACTTCTGCATTTTCCGTGCTCCAATGTCCTTTTTCGATTCCACTCCAAGTGGGCGAATCCTCAACAGAGCCTCAACTGACCAAAGTGCAGTGGATACAGACATTCCTTATCAAATTGGATCATTTGCCTTCTCTCTGATCCAGCTTCTGGGAATTATTGTAGTGATGTCTCAGGTTGCATGGCAGGTTTTCTTTGTCTTTATACCTGTGATAGCAGTCAGCATCTGGTATCAGCAATATTATCTACCATCGGCCCGGGAACTATCGCGTTTAGTTGGAGTGTGCAAGGCCCCAATCATTCAACACTTTGCTGAAACAATTTCTGGCACTTCAACCATTAGAAGCTTTGATCAGCAGTCAAGATTTCAGGAAACAAATATGAAACTGACTGATGGGTATTCTCGGCCGAAGTTCAACATTGCTGGTGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCGTCTATCACATTTGCCTTTTCCTTAATATTCTTAATATCTATTCCACAAGGAGTCATAGATCCAGGCATTGCCGGTTTAGCCGTTACCTATGGACTTAATTTGAACATGATACAAGCTTGGGTGATATGGAATCTTTGCAACTTGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTATACTTGTATTCCCAGCGAGCCTTCCCTTGTTGTAGAAGAAAATCGGCCTGATCCTTCTTGGCCCCCATATGGCAAGGTTGATATACAAGATTTGCAGGTTCGCTATGCTCCACATCTTCCACTTGTATTGCGGGGCCTTACATGCACGTTTTTGGGGGGACTGAAAACCGGCATAGTTGGGAGAACAGGAAGTGGTAAATCGACTCTTATACAAACACTTTTCCGAATTGTCGAGCCTACTTCTGGGCAAGTTATGATTGACGACATCAACATCTCTTCAATCGGACTTCATGATCTGAGGTCTAGACTAAATGAACAAATTTGGGAGGCCCTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTCTGCAGTTAGCGAAAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTCTGCCTTGGTAGGGTGTTGCTTAAGAAAAGCAAGGTTTTGGTGCTTGATGAAGCGACTGCATCTGTTGACACCGCCACGGATAATTTGATTCAGCAAACTCTCAGGCAACATTTCTCTGACTCCACAGTCATTACCATTGCACATCGAATAACATCTGTTCTTGATAGTGATATGGTTCTCCTTCTTAGTCAAGGACTTATTGAGGAGTATAACTCCCCAACAACATTGCTAGAGAATAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATACCATGAGATCCAACTCCAGTTTTGGAAAATCTGCTGATCGCTGA 4431 0.4105 MLSVFSNLSLMHFATGFLFKPNFLHGLSGFLHLLLLVAVLVSWVWKKITVGARDESKEKSNSTLFKTTVFCALGVSAFSVVLFLFNYFYWYRSGWTEEKLVTLLDLAFKTVAWGVVCVCLHNGFFSSGERRFSFFFRAWCVFYLLISCYSFVVDIVVLYEKNVVLPVQYLVCDLVSTCAGLFFCYVGYFLKNEGQDNILQEPLLNGDTNVGNALESKETKGGDTVTPYSNAGLLSSLTFSWVGPLVAVGKKKTLDLEDVPQLDSGDSVVGAFPSFRDKLEADCGAINSVTILKLVKSIIVSSWKEILFTAILALLNTLASYVGPYLIDAFVQYLDGQRQYENQGYALVSAFFFAKIVECLTQRHWFFRLQQVGIRIRSLLVTMIYNKTLTLSCQSRQGHTSGEIINFMTVDAERVGVFSWYMHDLWMVALQVTLALLILYKNLGLASIAAFIATIVVMLANVPLGSLLEKFQDELMKSKDTRMKTTSEILRNMRILKLQGWEMKFLSKITELRKTEQGWLKKYVYSAAITTFVFWGAPTFVSVVTFGTCMLMGIPLESGKILSALATFRILQEPIYNLPDTISMIAQTKVSLDRIASFLRLDDLRSDIVEKLPWGGSDMAIEVIDGNFSWDLSASDPTLQNINLRVFHGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGKHMDRERYEKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQIARALYQDADMYLFDDPFSAVDAHTGSHLFKECLLGFLSSKTVVYVTHQVEFLPAADLILVMKDGRITQCGKYDDLLSNGTDFLELVGAHKKALSTLNSLDGETVSNEISASEQDVNVSATHDVQEKEANKDEPNGKTDDTSEPKGQLVQEEEREKGKVGFSVYWKYITTAYGGALVPFILLAQILFQALQIGSNYWMAWATPISSDVEPPVGGTTLIAVYVGLAIGSSLCILVRALLLATAGYKTATILFNKMHFCIFRAPMSFFDSTPSGRILNRASTDQSAVDTDIPYQIGSFAFSLIQLLGIIVVMSQVAWQVFFVFIPVIAVSIWYQQYYLPSARELSRLVGVCKAPIIQHFAETISGTSTIRSFDQQSRFQETNMKLTDGYSRPKFNIAGAMEWLCFRLDMLSSITFAFSLIFLISIPQGVIDPGIAGLAVTYGLNLNMIQAWVIWNLCNLENKIISVERILQYTCIPSEPSLVVEENRPDPSWPPYGKVDIQDLQVRYAPHLPLVLRGLTCTFLGGLKTGIVGRTGSGKSTLIQTLFRIVEPTSGQVMIDDINISSIGLHDLRSRLNEQIWEALDKCQLGDEVRKKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYNSPTTLLENKSSSFAQLVAEYTMRSNSSFGKSADR* 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1824 1476 Gene3D - 613 863 IPR027417 -
Apr9g1824 1476 SMART AAA_5 648 821 IPR003593 -
Apr9g1824 1476 SMART AAA_5 1277 1444 IPR003593 -
Apr9g1824 1476 Pfam ABC transporter transmembrane region 934 1177 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr9g1824 1476 Pfam ABC transporter transmembrane region 307 574 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr9g1824 1476 Pfam ABC transporter 639 773 IPR003439 GO:0005524
Apr9g1824 1476 Pfam ABC transporter 1270 1391 IPR003439 GO:0005524
Apr9g1824 1476 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1251 1460 IPR003439 GO:0005524
Apr9g1824 1476 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 934 1214 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr9g1824 1476 MobiDBLite consensus disorder prediction 875 908 - -
Apr9g1824 1476 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Apr9g1824 1476 Gene3D - 1328 1462 IPR027417 -
Apr9g1824 1476 Gene3D - 1234 1327 IPR027417 -
Apr9g1824 1476 CDD ABCC_MRP_domain2 1249 1444 - -
Apr9g1824 1476 SUPERFAMILY ABC transporter transmembrane region 932 1231 IPR036640 GO:0005524|GO:0016021
Apr9g1824 1476 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1329 1472 - -
Apr9g1824 1476 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 89 1328 - -
Apr9g1824 1476 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 89 1328 - -
Apr9g1824 1476 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1329 1472 - -
Apr9g1824 1476 ProSitePatterns ABC transporters family signature. 746 760 IPR017871 GO:0005524
Apr9g1824 1476 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 621 844 IPR003439 GO:0005524
Apr9g1824 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 843 IPR027417 -
Apr9g1824 1476 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 587 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr9g1824 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1243 1457 IPR027417 -
Apr9g1824 1476 MobiDBLite consensus disorder prediction 865 908 - -
Apr9g1824 1476 CDD ABCC_MRP_domain1 621 821 - -
Apr9g1824 1476 Gene3D ABC transporter type 1, transmembrane domain 287 603 IPR036640 GO:0005524|GO:0016021
Apr9g1824 1476 Gene3D ABC transporter type 1, transmembrane domain 895 1232 IPR036640 GO:0005524|GO:0016021
Apr9g1824 1476 CDD ABC_6TM_ABCC_D2 932 1226 IPR044726 GO:0140359
Apr9g1824 1476 SUPERFAMILY ABC transporter transmembrane region 298 600 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1824 Apr-Chr9 27070248 27076399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1824 621 851 Calmodulin-binding Proteins AT2G36910 30.279 1.75e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1824 - K05666 gmx:100777836 2505.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1824 9 27070248 27076399 Apr9g1824 9 27070248 27076399 ECH