Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1818 ATGGCTGCTATTATATCTCTCTATCCTTATAATCCTATGTTACACATTACAATTCCTTCGTGTTCTACTTCTCCAATTCGAAACTTGGAGAGATTTCAATTGGGTTCCAGAAGGTGGAAGAATTTGGTGGAGCTTGCAGCACATTCCAATCCGAAGATTCTCAAGACTAACCGAAGGTCAAGGTATGGACAAGCCTTCTCACTGTATGACAGTGATGAAGACGATGAAGAAATGGACGATGATGATGACGAAGACGATGATGTTTGCCTTTCTGATGATGAATTTGCTGAGCCTGCTGACTTTGATGTTAATAACAAGAGATTTAAGTCACAGACAATTAAAGGAAAAGATACACAACAGGAAAGGGATTGGGGTGTGAGATCTTATAACAATGAACAAAGAACTGCAATGACCAAAAGTGAGCGAGTGGCATCGTTACAACGAAATGACAGTAGAAAGTTTAGTAGAAATTTAAAGGAGGAAAAGTATCCACAGTTGTCCGAAGAGATTGATTTGGATGATAAATGGTTACCGCTTCTTGATTATTTAAGCACCTTTGGAATTAAGGAATCACACTTTATCCAAATGTATGAGAGGCACATGCAATCACTTCAAATTAATGTTTGTTCTGCACAGGAAAGATTGGAATACTTATTGAGTGTTGGTGTTAAACATAGAGATGTAAGAAGAATTCTTTTGAGGCAGCCACATATTCTTGAGTATACAGTGGAGAACAATTTGAAGTCTCATGTTGCGTTCTTGAGGGGCCTGGGCATACCTAATTCCAGAATAGGGCAAATCATTACAACTACTCCATCCCTATTTTCTTATAGTGTCGAGAATTCATTAAAACCAACTGTAAGATATTTAGTTGAGGAAGTCGGCATCAAGGAAAAAGATTTGGGTAAAGTCATTCAGCTTAGTCCCCAAATTCTTGTGCAGCGAATTGACATTTCATGGAATACTCGATATATGTTTCTTACGAAAGAGTTGGGTGCACCCAGAGATAGCATTGTGAAGATGGTGACAAAACATCCCCAGCTTCTCCATTACAGCATAGATGATGGATTACTTCCAAGAATAAAATTCCTAAGGAGCATAGGAATGAAAAATTCAGACATCGTGAAAGTCTTGACTAGCCTTACACAGGTCATTTTGCATGTATTTTCCTCATTATTAATTTATGGTGATTATCCTGTTTTACTGTTCCAAATTTCCATTTTATGCTGTTTTGTGCTATCTCTGTCCTTGGAGGAGAATCTAAAACCCAAGTATTTGTACTTGGTAAATGAACTTAACAATGAGGTGCAATCCTTGACCAAATACCCAATGTATCTTAGCTTGTCTTTGGACCAGAGAATTCGTCCTCGTCATAGGTTCTTGGTTTCCCTAAAGAAAGCTCCAAAAGGGCCATTTCCACTTGGATCTCTCGTTCCAACTGATGAATCTTTTTGTCAACAGTGGGCTGGAACTAGTTTAGATGCGTATTTGGCATTCCGCCAGAGATTATTACTTAAAAAGTTTGCTGAGAAATATGAAAGAAAAATGTGA 1551 0.3804 MAAIISLYPYNPMLHITIPSCSTSPIRNLERFQLGSRRWKNLVELAAHSNPKILKTNRRSRYGQAFSLYDSDEDDEEMDDDDDEDDDVCLSDDEFAEPADFDVNNKRFKSQTIKGKDTQQERDWGVRSYNNEQRTAMTKSERVASLQRNDSRKFSRNLKEEKYPQLSEEIDLDDKWLPLLDYLSTFGIKESHFIQMYERHMQSLQINVCSAQERLEYLLSVGVKHRDVRRILLRQPHILEYTVENNLKSHVAFLRGLGIPNSRIGQIITTTPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRYMFLTKELGAPRDSIVKMVTKHPQLLHYSIDDGLLPRIKFLRSIGMKNSDIVKVLTSLTQVILHVFSSLLIYGDYPVLLFQISILCCFVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDESFCQQWAGTSLDAYLAFRQRLLLKKFAEKYERKM* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1818 516 Pfam mTERF 180 254 IPR003690 GO:0003690|GO:0006355
Apr9g1818 516 Pfam mTERF 252 388 IPR003690 GO:0003690|GO:0006355
Apr9g1818 516 Pfam mTERF 409 464 IPR003690 GO:0003690|GO:0006355
Apr9g1818 516 Gene3D Transcription termination factor 3, mitochondrial 148 281 IPR038538 -
Apr9g1818 516 Gene3D Transcription termination factor 3, mitochondrial 282 503 IPR038538 -
Apr9g1818 516 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 412 508 - -
Apr9g1818 516 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 34 385 - -
Apr9g1818 516 PANTHER CGI-12 PROTEIN-RELATED 34 385 IPR003690 GO:0003690|GO:0006355
Apr9g1818 516 PANTHER CGI-12 PROTEIN-RELATED 412 508 IPR003690 GO:0003690|GO:0006355
Apr9g1818 516 SMART mt_12 436 467 IPR003690 GO:0003690|GO:0006355
Apr9g1818 516 SMART mt_12 265 297 IPR003690 GO:0003690|GO:0006355
Apr9g1818 516 SMART mt_12 339 370 IPR003690 GO:0003690|GO:0006355
Apr9g1818 516 SMART mt_12 403 435 IPR003690 GO:0003690|GO:0006355
Apr9g1818 516 SMART mt_12 229 260 IPR003690 GO:0003690|GO:0006355
Apr9g1818 516 SMART mt_12 302 334 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr9g1818 mTERF 3.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1818 K15032 - gmx:102660933 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1818 9 27032860 27035891 Apr9g1818 9 27032860 27035891 ECH