Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1816 ATGTCTCAGAAACATAAAATGTCCTTTGGCTCTGGCAGCTTCAGCATTGAGCCTGTGCAAAATCTGGGGTCATATTGCTTCTTGCAAAATGAGAACACAGACAACTACTCATCCTCTGATAACAGTAGCCATGCAACCTACCCTTCTTTTCATAATTTAGAACAATATTGCACCCTTGAATCCTCTGCAAACAACAGTTTCCCTTACTTAAATTCTCCATCTACTGTCAGTTTCTCACCTAACAATAGCCCAGTCTCAAAGCTACAGTCAAAATCATACGTGTTGAGTTCGCAGCATTCTCTTGAAATTATTAATGATTCACTAGAAAATGAATCTTGTTTGACACATAACCAGGATGATCTGAGGCACAAGATAAGAGAGCTTGAAAGTGCTATGTTGGGACATGATTCAGACATTCTGGATACATATGATACTGTTATTCCAGAAGAATCTGATTCATTTTTGTTAGAGGCAGAGAGGTGGAAGAAAATGATGGAAGTGATATCAAGAGGGGATTTGAAAGAGATGCTTTTTACATGTGCGAAAGCAGTGGCTGGAAATGATATGGAGACAGCTGAATGGTTGATGTCCGAGTTGCGTAAAATGGTCTCCATTTCAGGCAACCCAACTGAACGATTAGGAGCCTACATGTTGGAAGCTCTTGTTGCAAGGCTGTCCTCTTCAGGAAGCACAATCTACAAAGCCTCAAAATGTAAAGAGCCAACTGGAAAAGAACTCCTTTCATACATGCATTTGCTTTATGAAGTTTGTCCATATCTCAAATTTGGGTACATGTCAGCAAATGGAGCAATTGCTGAAGCTGTGAAGGAGGAAAGTGAAGTCCACATAATTGATTTTCAGATTAACCAGGGAATCCAGTGGGTAAGCCTGATCCAAGCCCTTGCTAGCCGAGCTGGAGGACCGCCAAAGATCAGAATAACAGGTGTTGATGACTCCAATTCAGCTTATTACAGGGGAGGGGGCCTTGAAATTGTTGGAAAAAGGTTATCAAGGCTTGCACATTCATGTAATGTACCCTTTGAGTTCCATGCTATAGGAGTTGCTCCTTCTGAGGTGAGACTTGAAGACCTTGAACTTCGACCTAGTGAAGCTATTGCTGTGAATTTTGCCATGATGCTGCACCATGTACCAGATGAAAGTGTGGACTGTCAGAATCATCGTGACCGGTTGGTGAGATTGGCAAAGTGCTTGTCTCCTAAGGTGGTGACACTGGTTGAGCAAGAATCAAATACCAACCACCTTCCGTTCTTGCCCCGTTTTGTTGAGACAATGAATTACTACTTGGCCGTTTTTGAGTCTATTGATGTTGCTTTGCCAAGGGAGCACAAAGAAAGGATTAATGTGGAACAGCATTGTTTGGCTACAGAAGTTGTTAACTTAGTAGCATGTGAAGGGGCAGAAAGAGTGGAACGTCATGAGCTTCTGCTGAAGTGGAGATCACGTTTCACAATGGCCGGATTCACACCATATCCATTGAGCTCCTTTATTAATGGTTCAATAAAAAATCTTCAGCAAAGCTACCAAGGACAATACACTCTAGAAGAGAGAGATGGTGCTCTATGTCTTGGTTGGATGAACCAAGCTCTTGTTTCCTCTTGTGCTTGGAGGTGA 1632 0.4222 MSQKHKMSFGSGSFSIEPVQNLGSYCFLQNENTDNYSSSDNSSHATYPSFHNLEQYCTLESSANNSFPYLNSPSTVSFSPNNSPVSKLQSKSYVLSSQHSLEIINDSLENESCLTHNQDDLRHKIRELESAMLGHDSDILDTYDTVIPEESDSFLLEAERWKKMMEVISRGDLKEMLFTCAKAVAGNDMETAEWLMSELRKMVSISGNPTERLGAYMLEALVARLSSSGSTIYKASKCKEPTGKELLSYMHLLYEVCPYLKFGYMSANGAIAEAVKEESEVHIIDFQINQGIQWVSLIQALASRAGGPPKIRITGVDDSNSAYYRGGGLEIVGKRLSRLAHSCNVPFEFHAIGVAPSEVRLEDLELRPSEAIAVNFAMMLHHVPDESVDCQNHRDRLVRLAKCLSPKVVTLVEQESNTNHLPFLPRFVETMNYYLAVFESIDVALPREHKERINVEQHCLATEVVNLVACEGAERVERHELLLKWRSRFTMAGFTPYPLSSFINGSIKNLQQSYQGQYTLEERDGALCLGWMNQALVSSCAWR* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1816 543 ProSiteProfiles GRAS family profile. 164 543 IPR005202 -
Apr9g1816 543 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 16 542 - -
Apr9g1816 543 Pfam GRAS domain family 173 543 IPR005202 -
Apr9g1816 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 542 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1816 Apr-Chr9 27023419 27027057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1816 49 543 GRAS Transcription Factor Family AT1G50600 59.481 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr9g1816 GRAS 1.6e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1816 - - gmx:100779977 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1816 9 27023419 27027057 Apr9g1816 9 27023419 27027057 ECH
Apr2g0271 2 3288991 3292552 Apr9g1816 9 27023419 27027057 PCT