Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1812 ATGATGCCGAGTGTTAACCCTGACCCATCTGACAAAGATTCTGAGCCATTTGTCGAAACCGACCCAACTGGGAGATATGGTAGATACAGCGAGTTACTTGGATGTGGTGCTGTGAAAAAAGTGTACCGTGCATTTGACCAAGAGGAAGGAATAGAGGTGGCTTGGAACCAAGTGAAGCTCAGAAACTTCTGTGATGATCCTGCCATGGTGGATAGGCTTTACTCTGAAGTAAGGTTGCTCAGAAGCTTGACCAACAGAAACATCATTGCCCTTTACAGTGTGTGGAGGGATGAGCAACGTAACACTCTCAATTTCATCACAGAGGTTTGTACAAGTGGGAATTTGAGGGAGTACAGAAAAAAGCACAAGCATGTTTCCATGAAGGCCCTCAAGAAGTGGTCTAAGCAGATTTTGAAAGGGTTGAATTATTTGCATACTCATGAGCCATGCATCATTCACAGAGATCTCAATTGTAGCAATGTGTTTGTCAATGGGAATATTGGCCAGGTTAAGATTGGTGACTTGGGTCTGGCGGCAATTGTGGGCAAGAATCATTGCGCACACTCAATTCTTGGTACACCAGAATTTATGGCTCCAGAGTTATACGATGAAGACTACACAGAATTGGTGGATATATACTCATTTGGGATGTGTGTGTTAGAGATGGTGACACTAGAGATTCCTTATAGTGAATGTGACAACGTTGCAAAGATATACAAGAAAGTGTCTTCTGGAGTTAGACCTGCTGCATTGAACAAGGTCAAAGATTCAGAGGTGAAGGCCTTCATTGAGAAGTGCCTTGCTCAGCCAAGGGCTAGACCTTCTGCTTCTGAGCTTCTCAAAGATCCTTTTTTTGATGAGATTGTTGATGATGATGACGAAAATGATGACTGTTCTTGTTCATACTAA 909 0.429 MMPSVNPDPSDKDSEPFVETDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPAMVDRLYSEVRLLRSLTNRNIIALYSVWRDEQRNTLNFITEVCTSGNLREYRKKHKHVSMKALKKWSKQILKGLNYLHTHEPCIIHRDLNCSNVFVNGNIGQVKIGDLGLAAIVGKNHCAHSILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGVRPAALNKVKDSEVKAFIEKCLAQPRARPSASELLKDPFFDEIVDDDDENDDCSCSY* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1812 302 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Apr9g1812 302 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 302 - -
Apr9g1812 302 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1812 302 CDD STKc_WNK 25 285 - -
Apr9g1812 302 MobiDBLite consensus disorder prediction 1 23 - -
Apr9g1812 302 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Apr9g1812 302 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Apr9g1812 302 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1812 302 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1812 Apr-Chr9 27000568 27002787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1812 6 289 MAP Kinase Kinase Kinase AT5G55560 83.451 0.0 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr9g1812 Pkinase 7.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1812 K08867 - gmx:100816060 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1812 9 27000568 27002787 Apr9g1812 9 27000568 27002787 ECH
Apr2g0268 2 3263528 3265305 Apr9g1812 9 27000568 27002787 PCT