Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1811 ATGGTATGTACAAAAGGTGAGTTATCAGAATCTGAGTCTTTCTTCAATTTCATTAGAGCTGTTGATCCCCAAAACGTGCTTAACATTACATGGAATGAGTCACCATCGCATCCATGCTTGGTCAAGTTCAATGGTATAAGATGTAACTCAAATGCTACCAATATTGTGCAGATAAGGCTTGAAAACTTGAACCTTAGTGGCATAATCCATGCAGATTCCCTATGCAGGCTAAAAGAACTTAGAGTGGTGAGCTTAGCTAAGAATAACATTAGAGGAACCATTCCACACTCAATTTTACACTGTACAAGGTTGACACATTTAAATGTAAGTAGCAATCAATTGAGTGGGAGGTTGCCAAAAGCCTTAACAAAGTTAAAACATCATAAGAACTTAGACATCTCTAACAATAATTTTTCTATTAAGATCCCAAGTAAACAAGAATATAGGCGCCTTATTACTTATTATGTTACTCCAAGAAAGTCAGAACGCAACACTACAAAAGAGTGGCTAAAGGAAAATGAAACCTTGTTGGCCTTAGTTTTGGGCACTGGATTGCTTTTGTCATCCCTTTACTTTATGATCAGGAAATCATCACAGTTCAATGAAGAGAAACAGGTAGAGAAAGGCCATCATCATCGTGTGTCTCCAATAAAAGAGGCTACAACTCATGAGATTCAAGAAGTGAAGCAAAAGGAAGGAGATTCAGAACTTGTGTTCTTTGTTGAAGATCGAGAAAGGTTCACACTAGAGGACCTTCTTCGAGCCACAGCTGACTTAAGAAGTGAAAGCTTTTCCAGCAGCCTTTACAAGGTGAAACTGGAGAATAATGTGAACTATGCAGTCAAAAGATTGAAGAATTTGCAGGTATCCTCTGAAGAATTTGGTGAAACGTTAAGGAAGATAAGTAATTTGAAGCACCCAAATATCCTCCCCCTTGTTGGTTACCGTTCTACCACTGAGGAAAAACTCATCATTTACAAATATCAAAGCAATGGAAGCCTGCTTAATCTATTAAACGATTATATAGCAGGTAGAAAAGATTTCCCATGGAAGCTACGTCTCAATATAGCATGTGGCATTGCACGGGGTTTGGCCTTCATATACCGAAAGTTGGAAGGAGAAGAGGCCATTCCACATGGAAATCTTAAGCTATCAAATATCCTTCTTGATGACAACAATGAACCATTAATAAGTGAGCATGGTTTATCAAAATTCTTGGACACAAATACAGGTTTCCTCTTTTCCTCACAAGGGTATACAGCTCCTGAAAAGAGCTTAACAGAAAAGGGTGATGTGTATAGCTTTGGAGTGATCCTCTTGGAACTACTAACAGGAAAAAGCATAGAGATTAGTAGAATAGACCTTGCAAGATGGGTCACGTCCATGGTGAAGGAGGAATGGACAGGAGAAGTATTTGACAAAGAGGTTAAGGAAAAAGAACATCAATGGGCATTTCCACTGCTAAATATAGCCCTTGTATGTGTGTCACGTTTCCAAGAAAATAGGCCTACCACTGGAGAGATTTTGGAGAAGATAGCAGAAGTGATGGATGAACATGATCAACATCAAGAACGTTTTGCTTCAAGATGTTGTTCTAATGGATCCAACCGTGATGAATGTTGTTCACTTCACAAGATCATACCTGAAAGTTGGGATTCTCCAGGATCAAATTATTGA 1677 0.3858 MVCTKGELSESESFFNFIRAVDPQNVLNITWNESPSHPCLVKFNGIRCNSNATNIVQIRLENLNLSGIIHADSLCRLKELRVVSLAKNNIRGTIPHSILHCTRLTHLNVSSNQLSGRLPKALTKLKHHKNLDISNNNFSIKIPSKQEYRRLITYYVTPRKSERNTTKEWLKENETLLALVLGTGLLLSSLYFMIRKSSQFNEEKQVEKGHHHRVSPIKEATTHEIQEVKQKEGDSELVFFVEDRERFTLEDLLRATADLRSESFSSSLYKVKLENNVNYAVKRLKNLQVSSEEFGETLRKISNLKHPNILPLVGYRSTTEEKLIIYKYQSNGSLLNLLNDYIAGRKDFPWKLRLNIACGIARGLAFIYRKLEGEEAIPHGNLKLSNILLDDNNEPLISEHGLSKFLDTNTGFLFSSQGYTAPEKSLTEKGDVYSFGVILLELLTGKSIEISRIDLARWVTSMVKEEWTGEVFDKEVKEKEHQWAFPLLNIALVCVSRFQENRPTTGEILEKIAEVMDEHDQHQERFASRCCSNGSNRDECCSLHKIIPESWDSPGSNY* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1811 558 Gene3D Transferase(Phosphotransferase) domain 1 330 536 - -
Apr9g1811 558 ProSiteProfiles Protein kinase domain profile. 253 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1811 558 SUPERFAMILY Protein kinase-like (PK-like) 266 510 IPR011009 -
Apr9g1811 558 Gene3D Ribonuclease Inhibitor 9 156 IPR032675 -
Apr9g1811 558 Pfam Leucine rich repeat 79 138 IPR001611 GO:0005515
Apr9g1811 558 PANTHER TYROSINE KINASE FAMILY PROTEIN 2 551 - -
Apr9g1811 558 SUPERFAMILY L domain-like 50 149 - -
Apr9g1811 558 Pfam Protein tyrosine and serine/threonine kinase 271 511 IPR001245 GO:0004672|GO:0006468
Apr9g1811 558 PANTHER OS05G0588300 PROTEIN 2 551 - -
Apr9g1811 558 Gene3D Phosphorylase Kinase; domain 1 218 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1811 Apr-Chr9 26995178 26997405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1811 2 518 Receptor kinase-like Gene Family AT5G53320 31.142 1.59e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr9g1811 PK_Tyr_Ser-Thr 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1811 - - aprc:113874587 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1811 9 26995178 26997405 Apr9g1811 9 26995178 26997405 ECH