Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1805 ATGAGGCAAAGCAGTAACGCAGAAACTACGGAGGCTCGTTTCTCGGCCACCATTTCCTCCTCTTCTCTCAGAAACCTTCTTCACAGATCAATCTCTTCCAAGCACAAACCCACTTCAAACCCTAAAATCCCAAAATCAGATGCAGAGAACACTCCACCCACCCACCCCAACGTCCAGATCGACCATGACCAATCGTTGCCTTCCACAGCCAAGCAATCATACTCCCAAACCTCAATTTCCCCGAACAACCTTAACCAATCGAAACCCGCTCTTCAACCGGATCCATCAGTCAAGGTTGCAGTACGAATTAGACCTGCCAATAACAATGGAATAGAGGGAGATCGAACCGTTAAGAAGGTTTCTTCTGATACCTTGTATGTTGGGGATAGGCAATTTACATTTGACTCGGTTTTTGATTCCAACACCAATCAGGAGGATATTTTTCAGTCAGTGGGTGTGCCCTTGGTTAGAAATGCTTTAGCTGGTTACAACACTTCAATTCTGTCATATGGCCAGTCTGGAAGTGGAAAGACTTATACAATGTGGGGTCCCCCAAGTGCTATGTTTGAGGAGCCCTCACCCCAAAGTCACAAGGGAATTGTTCCTCGGATCTTCCAGATGTTATTTTCTGAGCTTGAGAAAGAGCAGCAAATGTTTGAGGGCAAACAGTTCAACTATCAGTGCCGATGTTCTTTCCTTGAGATATACAATGAGCAAGTTGGGGATTTACTTGATCCAACCCAGCGGAATCTTCAGATGAAAGATGATTCCAAAAATGCATTGTACATAGAGAATTTGACTGAGGAATACGTCACTAGCTATGATTATGTGACACAAATTCTGATCAAGGGCCTTTCGAGTAGAAAAGTTGGGGCAACAAGCTTAAATTCTAAGAGCTCTAGATCACATATCATTTTCACTTTTGTGATTGAGTCATGGTGTAAGGGAATCTCATCAAATGTTTTCAGTAGTTCAAAAACTAGCAGAATTAGCCTTATAGATCTTGCTGGACAAGACAGGAACAAAGTTGATGATGCAGGCAAAAAATGTATGAGGGAAAGCAAAAATGTAAAGAAGTCCTTGTCTCAGCTAGGGCACTTAGTAGATGCTTTGACTAAAGAAACTCACTCCAGAAAAGGACAAGCAATTCCAAGCAGGAAATCCTGTTTAACACGATTACTACAGGAATCACTTGGTGGAAATTCCAAACTCTCAGTAATCTGTTCCATCTTCCCTGATAACAAGAATAATGGTGAAACACTGCGCACACTAAGGTTTGGACAGAGAGTAAGGTCCATTAGAAATGAACCTGTTATCAATGAAATAAAGGAGGATGATGTTAATGATTTGAGTGATCAAATCCGGAAGCTCAAGGAAGAACTTATTAGAGCAAAGGCTGAGGTTCACAGCTCAGATGGGAGTAAAAATGGATTCTTCCAAGTATGTAATGTACGGGAAAGCCTTAATCAGTTGAGAGTCAGCTTAAACCGTTCTCTAATCCTGCCTCATGTTGACAATGACACTACTGAGGAGGTAAATGTGGATGAGGAGGACATAAAGCAATTACGCCAGCAGATTGATGAATTGTATAGTTCATGTGAAGGGAATCTTAAAGACATATCTGTAAGTGAAGATTGTATACAGTATTATTCTGTTGCGGAAAATTGTGAAGCAGATGTGATCAGTGGCGATGAAACTGAAAGAGAGGAAGTGTGTTCTAGGGAAACACTCAGTAAGCTTTGTCACGAGGAAAGTGAGGGATCAGCTAACACCTTGTATGCATCAGCAGATGACTTTGTATGCACTGCTAAGTCTTCAAGGGCAATTAGATCTTCATTCAGAGATAGCATTTCAGTTAGTTCATGCAGCCGATCCCCAATACTTGAGGAACCACAGTTGTCTGAGTCTCCAAAAATCAGGAATACCCAGAGGAAAAGTGTGGCTTATTCATCAAGTTGTCTGGGAAGTTGGAATACTGTGGCAGAGGAGAATTTGAGTTCCAGTCAAGATATATTAGGACAATCTCTTAAACAGGGTGAGCAGATGAAATCATCACTACGGTCAAGCAAGGTTTTTCCAGGTCCTACCGAGTCCTTGGCAGCAAGCCTTCAGAGGGGATTACAGATAATTGATTATCATCAGCGGAACTCAGCATTAAACAAATCTTCAGCTTCTTTCTCTTTTGAGCACTTAACCTTGACACCTTGTCCAGAAATAGACAGTGGTGATTCTTGTGATCAGGCAATGCGACAGAAGAAATATTATGTTGATGAAAGAACTGCTACTCTGCTTTGTGAATCATGCCGTAAAAAAATATATGATCAGGATTCCACAGAGTTTAAGGATAGCTTAAACTCACCAATTGACACAGCAGAAGCAGGAAATCCAGATGAACTGACAGATGAGGTTCCAAAAGATTTACAAAATGTAATAGAAAAAGCAACCGTAAGAGAAAAGGAGCTTGAGAATGTTTGCAAGGAGCAAGCTGCTAAAATTGAAGAACTAAATCAATTGGTGGAAAAATTAAAAGGAGAGAAAGAACTAAAATCATCCATCATTGTGTATGATCAAGAAAGCAACAAACAGAGTAGACAAGAAGAAGAGTATAACTCATTGAAAGATGAAGACAAGCTTCTGAGGGGCACTTCCTTAGACAGTCATTTACCAGATATTATAGAGGAAAAATGTGAAATTAAAGAAGTCCAGGAAGAAGTAACTCAAAGGGACAGCTCTTTTGATGCAGCTGAGAAGAAAGAACTTCTTAAGGAAATTCAAAATCTAAGAAGCAAGCTGCAATTATATGGCGATGCACCAGTTAAGAAGTCCACTGACAAACTGAGATCTTCCTTATCATTAATGTCAAGATCCATTCAACTGCGAAAAAGTAGTGTATTTTCTCCTGATAATGGTGGTGATGAACTAGAGAAAGAGAGACAGAGATGGACAGAAATGGAAAGTGAGTGGATATGTCTTACTGATGAACTAAGAGTTGATCTTGAGTCCAATCGCCAGCGGGCAGAGAGGGTGGAGATGGAACTAATTTTAGAGAAGAAATGCACTGAAGAGTTAGATGATGCACTAAAAAGAGCTGTTCTTGGACATGCTAGAATGGTGGAACATTACGCTGACCTCCAAGAAAAATATAATGATTTGGTTGCAAAGCACAATGCTATAATGGAAGGCATAGCACAGGTGAAGAAGGCAGCGGCAAAGGCTGGAAGAAAGGGTCATGCTCGCTTTGCCAAATCTCTTGCTGCTGAGCTTTCTGCATTGAGGGTGGAGAGAGAGAGGGAAACAAAATTCTTGAAAAAGGAGAACACGAATCTCAAGATTCAACTTAGAGACACTGCAGAGGCTGTTCATGCAGCTGGAGAACTTCTTGTTAGACTCAGGGAAGCTGAGCATGCAGCATCTATTGCAGAGGAGAATAATACAAAAGTGCAACAAGATAATGAAAAGCTAAAAAAGCAAATGGATAAGCTCAAAAGAAAACACAAGATGGAGATGATTACGATGAAGCAGTATCTTGCAGAGAGCAAATTACCAGAGTCTGCACTGCAGCCACTATTTAGAGAGGATTCTGATGTGATACACAACAATGCTAATTCCCATCCAGACGATGATCAGGCATGGAGAGTAGAGTTTGGAGCAATCTATCAGGAGCATTATTAA 3672 0.4085 MRQSSNAETTEARFSATISSSSLRNLLHRSISSKHKPTSNPKIPKSDAENTPPTHPNVQIDHDQSLPSTAKQSYSQTSISPNNLNQSKPALQPDPSVKVAVRIRPANNNGIEGDRTVKKVSSDTLYVGDRQFTFDSVFDSNTNQEDIFQSVGVPLVRNALAGYNTSILSYGQSGSGKTYTMWGPPSAMFEEPSPQSHKGIVPRIFQMLFSELEKEQQMFEGKQFNYQCRCSFLEIYNEQVGDLLDPTQRNLQMKDDSKNALYIENLTEEYVTSYDYVTQILIKGLSSRKVGATSLNSKSSRSHIIFTFVIESWCKGISSNVFSSSKTSRISLIDLAGQDRNKVDDAGKKCMRESKNVKKSLSQLGHLVDALTKETHSRKGQAIPSRKSCLTRLLQESLGGNSKLSVICSIFPDNKNNGETLRTLRFGQRVRSIRNEPVINEIKEDDVNDLSDQIRKLKEELIRAKAEVHSSDGSKNGFFQVCNVRESLNQLRVSLNRSLILPHVDNDTTEEVNVDEEDIKQLRQQIDELYSSCEGNLKDISVSEDCIQYYSVAENCEADVISGDETEREEVCSRETLSKLCHEESEGSANTLYASADDFVCTAKSSRAIRSSFRDSISVSSCSRSPILEEPQLSESPKIRNTQRKSVAYSSSCLGSWNTVAEENLSSSQDILGQSLKQGEQMKSSLRSSKVFPGPTESLAASLQRGLQIIDYHQRNSALNKSSASFSFEHLTLTPCPEIDSGDSCDQAMRQKKYYVDERTATLLCESCRKKIYDQDSTEFKDSLNSPIDTAEAGNPDELTDEVPKDLQNVIEKATVREKELENVCKEQAAKIEELNQLVEKLKGEKELKSSIIVYDQESNKQSRQEEEYNSLKDEDKLLRGTSLDSHLPDIIEEKCEIKEVQEEVTQRDSSFDAAEKKELLKEIQNLRSKLQLYGDAPVKKSTDKLRSSLSLMSRSIQLRKSSVFSPDNGGDELEKERQRWTEMESEWICLTDELRVDLESNRQRAERVEMELILEKKCTEELDDALKRAVLGHARMVEHYADLQEKYNDLVAKHNAIMEGIAQVKKAAAKAGRKGHARFAKSLAAELSALRVERERETKFLKKENTNLKIQLRDTAEAVHAAGELLVRLREAEHAASIAEENNTKVQQDNEKLKKQMDKLKRKHKMEMITMKQYLAESKLPESALQPLFREDSDVIHNNANSHPDDDQAWRVEFGAIYQEHY* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1805 1223 PANTHER CENTROMERE PROTEIN E 73 1223 - -
Apr9g1805 1223 Coils Coil 811 852 - -
Apr9g1805 1223 Coils Coil 512 532 - -
Apr9g1805 1223 SMART kinesin_4 94 441 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1805 1223 Pfam Kinesin motor domain 114 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1805 1223 MobiDBLite consensus disorder prediction 1 92 - -
Apr9g1805 1223 Coils Coil 855 875 - -
Apr9g1805 1223 PRINTS Kinesin heavy chain signature 162 183 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1805 1223 PRINTS Kinesin heavy chain signature 293 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1805 1223 PRINTS Kinesin heavy chain signature 329 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1805 1223 PRINTS Kinesin heavy chain signature 383 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1805 1223 ProSiteProfiles Kinesin motor domain profile. 96 433 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1805 1223 Coils Coil 440 467 - -
Apr9g1805 1223 MobiDBLite consensus disorder prediction 1 95 - -
Apr9g1805 1223 PANTHER KINESIN-LIKE PROTEIN KIN-12F 73 1223 - -
Apr9g1805 1223 Coils Coil 1130 1171 - -
Apr9g1805 1223 Coils Coil 917 937 - -
Apr9g1805 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 467 IPR027417 -
Apr9g1805 1223 Gene3D Kinesin motor domain 94 475 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1805 Apr-Chr9 26947057 26953078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1805 88 461 Miscellaneous Gene Families AT5G06670 34.197 5.89e-54 200
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1805 9 26947057 26953078 Apr9g1805 9 26947057 26953078 ECH
Apr2g0264 2 3215853 3221729 Apr9g1805 9 26947057 26953078 PCT