Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1788 ATGTCAGACCTAGACAGGCAAATAGAGCAGCTGAAGAGGTGCGAGCCTCTGAAGGAATCGGAAGTGAAAGCGCTTTGCCTGAAAGCCATGGAAATCCTCGTCGAAGAGAGCAACGTTCAGAGGGTTGACGCCCCTGTCACCATATGCGGTGATATACACGGTCAGTTTTATGATATGAAAGAGCTTTTCAGAGTAGGAGGTGATTGCCCCGAAACTAACTATTTATTCCTTGGGGATTTTGTCGATAGAGGCTTTTACTCCGTTGAAACATTTCTGCTTCTGCTCGCTCTTAAGGTGAGGTATCCAGATCGAATTACTCTAATTAGGGGAAACCATGAAAGCCGGCAGATCACACAGGTATATGGATTCTATGATGAGTGCCTTCGAAAATATGGTTCAGTCAATGTGTGGAGATATTGTACTGATATATTCGACTACTTAAGCTTGTCCGCCCTAATTGAAAACAAGATTTTCAGTGTTCATGGTGGTCTTTCTCCTGCCATTTCAACCTTGGATCAAATACGAACTATTGATCGGAAGCAAGAAGTACCTCATGACGGTGCCATGTGTGACCTCCTATGGTCAGATCCTGAAGATATTGTGGATGGATGGGGTCTGAGTCCCCGTGGTGCTGGTTTCTTATTTGGTGGCAGTGTTGTTACATCTTTTAACCACTCCAATAACATTGACTATATATGTCGTGCTCATCAGTTGGTAATGGAAGGATATAAATGGATGTTCAATAACCAGATAGTTACTGTCTGGTCAGCTCCAAATTATTGCTACAGATGTGGCAATGTGGCTGCAATTCTGGAGTTGGATGGAAATCTTAATAAGCAGTTCCGTGTGTTTGATGCTGCTCCACAGGAATCAAGAGGGACACCTGCCAAGAAACCGGCACCAGATTACTTCCTATGA 918 0.439 MSDLDRQIEQLKRCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFRVGGDCPETNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDGNLNKQFRVFDAAPQESRGTPAKKPAPDYFL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1788 305 Gene3D - 1 305 IPR029052 -
Apr9g1788 305 Pfam Calcineurin-like phosphoesterase 45 237 IPR004843 GO:0016787
Apr9g1788 305 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 305 - -
Apr9g1788 305 SUPERFAMILY Metallo-dependent phosphatases 2 292 IPR029052 -
Apr9g1788 305 PRINTS Serine/threonine phosphatase family signature 45 72 IPR006186 GO:0016787
Apr9g1788 305 PRINTS Serine/threonine phosphatase family signature 74 101 IPR006186 GO:0016787
Apr9g1788 305 PRINTS Serine/threonine phosphatase family signature 107 131 IPR006186 GO:0016787
Apr9g1788 305 PRINTS Serine/threonine phosphatase family signature 142 168 IPR006186 GO:0016787
Apr9g1788 305 PRINTS Serine/threonine phosphatase family signature 171 198 IPR006186 GO:0016787
Apr9g1788 305 PRINTS Serine/threonine phosphatase family signature 228 248 IPR006186 GO:0016787
Apr9g1788 305 PRINTS Serine/threonine phosphatase family signature 250 266 IPR006186 GO:0016787
Apr9g1788 305 SMART pp2a_7 17 288 IPR006186 GO:0016787
Apr9g1788 305 CDD MPP_PP2A_PP4_PP6 3 288 - -
Apr9g1788 305 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP-X ISOZYME 1 1 305 - -
Apr9g1788 305 ProSitePatterns Serine/threonine specific protein phosphatases signature. 108 113 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1788 Apr-Chr9 26853927 26858806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1788 24 223 Calmodulin-binding Proteins AT5G63870 36.364 3.62e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1788 K15423 - cit:102608319 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1788 9 26853927 26858806 Apr9g1788 9 26853927 26858806 ECH