Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1779 ATGAAATTGTTTTTTCAACCAATGCTTTCACCTCTCATGTTGATGTTTCTTAGTTGCTCTTTCTGGACTGGTGGAAGCATACAATGTGGGGGGAACCAAATCGCATACACTGTAATTGTTGATCAAAATGGCAAAGGAAAATTCCCAACGGTTCAAGCTGCCATTGATTCCGTAGAGAAAAACAACAACAAATGGGTTAAAGTTCGCATAAATGCTGGCACGTACATAGAGAAAGTTCAAATTTCCTTTCATAAACCGTGCATCATCTTAGAAGGTGCTGGCAAAGACATTACCTCTATTACATTCCACAGCAACCGCCCTACATTTGTGTCTTCTCCGCCCAACGTGGTGGTCATTGGCATTAGCTTCAAGAGGTTTGAAACAGAAAACCAAAAACAAGCTGTAACTTGA 411 0.4063 MKLFFQPMLSPLMLMFLSCSFWTGGSIQCGGNQIAYTVIVDQNGKGKFPTVQAAIDSVEKNNNKWVKVRINAGTYIEKVQISFHKPCIILEGAGKDITSITFHSNRPTFVSSPPNVVVIGISFKRFETENQKQAVT* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1779 136 Pfam Pectinesterase 38 109 IPR000070 GO:0030599|GO:0042545
Apr9g1779 136 Gene3D - 31 136 IPR012334 -
Apr9g1779 136 SUPERFAMILY Pectin lyase-like 34 127 IPR011050 -
Apr9g1779 136 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Apr9g1779 136 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 132 - -
Apr9g1779 136 PANTHER PECTINESTERASE 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1779 Apr-Chr9 26793354 26794550 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1779 4 124 Carbohydrate Esterase AT2G19150 36.508 5.01e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1779 - - aprc:113874578 261.922